LOC_Os10g17454 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os10g17454 T45142_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os10g17454.1 RRM 33 103
LOC_Os10g17454.2 RRM 33 103
LOC_Os10g17454.3 RRM 33 103

Links

Other RRM family RBPs
Other Oryza sativa RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE031567 Oryza indica BGIOSIBCE031567 N 0.845
BRADI3G24720 Brachypodium distachyon BRADI3G24720 N 0.775
PDK_20s1328241g004 Phoenix dactylifera PDK_20s1328241g004 N 0.761
cassava29352.valid.m1 Manihot esculenta cassava29352.valid.m1 N 0.746
cassava29351.valid.m1 Manihot esculenta cassava29351.valid.m1 N 0.746
GSVIVG00007865001 Vitis vinifera GSVIVG00007865001 N 0.746
Cucsa.198260 Cucumis sativus Cucsa.198260 N 0.746
mgf007732m Mimulus guttatus mgf007732m N 0.732
SB08G015580 Sorghum bicolor Sb08g015580 N 0.732
PK15111.1 Cannabis sativa PK15111.1 N 0.718
30138.m003973 Ricinus communis 30138.m003973 N 0.718
PDK_20s1615461g006 Phoenix dactylifera PDK_20s1615461g006 N 0.718
BRADI1G22210 Brachypodium distachyon BRADI1G22210 N 0.704
LOC_Os12g31800 Oryza sativa LOC_Os12g31800 N 0.704
B9I2R7_POPTR Populus trichocarpa POPTR_0012s05870 N 0.704
BGIOSIBCE036678 Oryza indica BGIOSIBCE036678 N 0.704
ppa010113m Prunus persica ppa010113m N 0.704
GRMZM2G150521 Zea mays GRMZM2G150521 N 0.704
cassava43399.valid.m1 Manihot esculenta cassava43399.valid.m1 N 0.704
A9PIG6_POPTR Populus trichocarpa POPTR_0015s06810 N 0.704