CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CMU_001200
(
Cryptosporidium muris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CMU_001200
T46472_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CMU_001200
RRM
19
86
LYIRQLPYKITADELYDIFGKYGTIKQIRRGTSLSTRGTAFVVYDDIYDAKNALEHLSGFQVAGRYIV
Links
Other
RRM
family RBPs
Other
Cryptosporidium muris
RBPs
60 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PBANKA_143980
Plasmodium berghei
PBANKA_143980
N
0.797
PY07239
Plasmodium yoelii
PY07239
N
0.794
PCHAS_144180
Plasmodium chabaudi
PCHAS_144180
N
0.783
PFL1200c
Plasmodium falciparum
PFL1200c
N
0.779
PVX_123875
Plasmodium vivax
PVX_123875
N
0.779
PKH_144160
Plasmodium knowlesi
PKH_144160
N
0.779
TA13725
Theileria annulata
TA13725
N
0.765
EDO06533.1
Babesia bovis
EDO06533.1
N
0.765
estExt_fgenesh1_pg.C_1580052
Nematostella vectensis
estExt_fgenesh1_pg.C_1580052
N
0.750
DGIL_AUG5s10565g5t1
Acyrtosiphon pisum
DGIL_AUG5s10565g5t1
N
0.735
amel4_ncbi_hmm5835
Tribolium castaneum
amel4_ncbi_hmm5835
N
0.735
nasonia_NCBI_hmm648054
Nasonia vitripennis
nasonia_NCBI_hmm648054
N
0.735
nasonia_NCBI_hmm146063
Nasonia vitripennis
nasonia_NCBI_hmm146063
N
0.735
amel4_ncbi_hmm5835
Apis mellifera
amel4_ncbi_hmm5835
N
0.735
fgeneshTA2_pm.C_scaffold_21000029
Trichoplax adhaerens
fgeneshTA2_pm.C_scaffold_21000029
N
0.725
XM_001098393.1
Macaca mulatta
ENSMMUG00000001282
N
0.721
0610009D07Rik
Mus musculus
ENSMUSG00000037361
N
0.721
ENSOANG00000007627
Ornithorhynchus anatinus
ENSOANG00000007627
N
0.721
ENSVPAG00000005546
Vicugna pacos
ENSVPAG00000005546
N
0.721
ENSMLUG00000002473
Myotis lucifugus
ENSMLUG00000002473
N
0.721
SF3B14
Gallus gallus
ENSGALG00000016501
N
0.721
ENSLAFG00000029423
Loxodonta africana
ENSLAFG00000029423
N
0.721
ENSMGAG00000014057
Meleagris gallopavo
ENSMGAG00000014057
N
0.721
ENSOCUG00000022008
Oryctolagus cuniculus
ENSOCUG00000022008
N
0.721
XM_515324.2
Pan troglodytes
ENSPTRG00000011709
N
0.721
SF3B14
Taeniopygia guttata
ENSTGUG00000013191
N
0.721
AC008073.5
Homo sapiens
ENSG00000115128
N
0.721
ENSSSCG00000008587
Sus scrofa
ENSSSCG00000008587
N
0.721
ENSTSYG00000013978
Tarsius syrichta
ENSTSYG00000013978
N
0.721
ENSTTRG00000013430
Tursiops truncatus
ENSTTRG00000013430
N
0.721
ENSTBEG00000012532
Tupaia belangeri
ENSTBEG00000012532
N
0.721
ENSPVAG00000011346
Pteropus vampyrus
ENSPVAG00000011346
N
0.721
ENSSARG00000011902
Sorex araneus
ENSSARG00000011902
N
0.721
ENSPPYG00000012603
Pongo pygmaeus
ENSPPYG00000012603
N
0.721
ENSCPOG00000008016
Cavia porcellus
ENSCPOG00000008016
N
0.721
AGAP002780
Anopheles gambiae
AGAP002780
N
0.721
ENSFCAG00000004304
Felis catus
ENSFCAG00000004304
N
0.721
ENSACAG00000011677
Anolis carolinensis
ENSACAG00000011677
N
0.721
AAEL005909
Aedes aegypti
AAEL005909
N
0.721
SPRG_00106
Saprolegnia parasitica
SPRG_00106
N
0.721
Ame_R001592
Ailuropoda melanoleuca
Ame_R001592
N
0.721
TP02_0539
Theileria parva
TP02_0539
N
0.721
CpipJ_CPIJ008576
Culex pipiens
CpipJ_CPIJ008576
N
0.721
Q2KIQ7_BOVIN
Bos taurus
ENSBTAG00000003407
N
0.721
CPIJ008576
Culex quinquefasciatus
CPIJ008576
N
0.721
sf3b14
Danio rerio
ENSDARG00000009753
N
0.721
ENSDNOG00000007148
Dasypus novemcinctus
ENSDNOG00000007148
N
0.721
LOC100056247
Equus caballus
ENSECAG00000015618
N
0.721
LOC100386467
Callithrix jacchus
ENSCJAG00000007716
N
0.721
0610009D07Rik
Dipodomys ordii
ENSDORG00000009772
N
0.721
XM_532889.2
Canis familiaris
ENSCAFG00000003957
N
0.721
ENSCHOG00000000689
Choloepus hoffmanni
ENSCHOG00000000689
N
0.721
e_gw1.13.49.1
Emiliania huxleyi
e_gw1.13.49.1
N
0.710
PHUM617060
Pediculus humanus
PHUM617060
N
0.706
sf3b14
Xenopus tropicalis
ENSXETG00000018204
N
0.706
ENSTRUG00000006551
Takifugu rubripes
ENSTRUG00000006551
N
0.706
ENSORLG00000015955
Oryzias latipes
ENSORLG00000015955
N
0.706
ENSTNIG00000009719
Tetraodon nigroviridis
ENSTNIG00000009719
N
0.706
XM_001364269.1
Monodelphis domestica
ENSMODG00000002144
N
0.706
Minc01156
Meloidogyne incognita
Minc01156
N
0.706