PKH_144160 (Plasmodium knowlesi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PKH_144160 T47479_0.6 EuPathDB (2010-Sep-21)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PKH_144160 RRM 16 83

Links

Other RRM family RBPs
Other Plasmodium knowlesi RBPs

121 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PVX_123875 Plasmodium vivax PVX_123875 N 1.000
PFL1200c Plasmodium falciparum PFL1200c N 1.000
PBANKA_143980 Plasmodium berghei PBANKA_143980 N 0.928
PCHAS_144180 Plasmodium chabaudi PCHAS_144180 N 0.913
PY07239 Plasmodium yoelii PY07239 N 0.912
EDO06533.1 Babesia bovis EDO06533.1 N 0.882
TA13725 Theileria annulata TA13725 N 0.853
TP02_0539 Theileria parva TP02_0539 N 0.809
estExt_fgenesh1_pg.C_1580052 Nematostella vectensis estExt_fgenesh1_pg.C_1580052 N 0.779
CMU_001200 Cryptosporidium muris CMU_001200 N 0.779
SPRG_00106 Saprolegnia parasitica SPRG_00106 N 0.779
AGAP002780 Anopheles gambiae AGAP002780 N 0.765
CpipJ_CPIJ008576 Culex pipiens CpipJ_CPIJ008576 N 0.765
BGIOSIBCE013412 Oryza indica BGIOSIBCE013412 N 0.765
AAEL005909 Aedes aegypti AAEL005909 N 0.765
estExt_GenewiseH_1.C_6800062 Branchiostoma floridae estExt_GenewiseH_1.C_6800062 N 0.765
LOC_Os03g59710 Oryza sativa LOC_Os03g59710 N 0.765
ISCW024082 Ixodes scapularis ISCW024082 N 0.765
CPIJ008576 Culex quinquefasciatus CPIJ008576 N 0.765
e_gw1.13.49.1 Emiliania huxleyi e_gw1.13.49.1 N 0.754
PITG_10282 Phytophthora infestans PITG_10282 N 0.754
s_454910 Phytophthora sojae s_454910 N 0.754
estExt_fgenesh1_pg.C_130126 Phytophthora capsici estExt_fgenesh1_pg.C_130126 N 0.754
SB01G003790 Sorghum bicolor Sb01g003790 N 0.750
ENSTRUG00000006551 Takifugu rubripes ENSTRUG00000006551 N 0.750
ENSTNIG00000009719 Tetraodon nigroviridis ENSTNIG00000009719 N 0.750
PHUM617060 Pediculus humanus PHUM617060 N 0.750
amel4_ncbi_hmm5835 Apis mellifera amel4_ncbi_hmm5835 N 0.750
amel4_ncbi_hmm5835 Tribolium castaneum amel4_ncbi_hmm5835 N 0.750
nasonia_NCBI_hmm648054 Nasonia vitripennis nasonia_NCBI_hmm648054 N 0.750
ENSCING00000012689 Ciona intestinalis ENSCING00000012689 N 0.750
ENSCSAVG00000008970 Ciona savignyi ENSCSAVG00000008970 N 0.750
GRMZM2G107745 Zea mays GRMZM2G107745 N 0.750
GRMZM2G358416 Zea mays GRMZM2G358416 N 0.750
DGIL_AUG5s10565g5t1 Acyrtosiphon pisum DGIL_AUG5s10565g5t1 N 0.750
nasonia_NCBI_hmm146063 Nasonia vitripennis nasonia_NCBI_hmm146063 N 0.750
estExt_fgenesh2_pg.C_240194 Selaginella moellendorfii estExt_fgenesh2_pg.C_240194 N 0.750
GG14070 Drosophila erecta FBgn0106332 N 0.739
fgenesh1_pm.C_scaffold_108000003 Phytophthora ramorum fgenesh1_pm.C_scaffold_108000003 N 0.739
fgeneshTA2_pm.C_scaffold_21000029 Trichoplax adhaerens fgeneshTA2_pm.C_scaffold_21000029 N 0.739
GL22529 Drosophila persimilis FBgn0160121 N 0.739
GM13852 Drosophila sechellia FBgn0168783 N 0.739
GD13137 Drosophila simulans FBgn0184859 N 0.739
GK17258 Drosophila willistoni FBgn0219257 N 0.739
estExt_fgenesh1_kg.C_20004 Daphnia pulex estExt_fgenesh1_kg.C_20004 N 0.739
GJ12004 Drosophila virilis FBgn0199256 N 0.739
GH16287 Drosophila grimshawi FBgn0123758 N 0.739
GI13232 Drosophila mojavensis FBgn0135989 N 0.739
CG13298 Drosophila melanogaster FBgn0035692 N 0.739
GE20495 Drosophila yakuba FBgn0068445 N 0.739
GA12181-RA Drosophila pseudoobscura FBgn0072229 N 0.739
GF10910 Drosophila ananassae FBgn0087950 N 0.739
ENSOANG00000007627 Ornithorhynchus anatinus ENSOANG00000007627 N 0.735
ENSOCUG00000022008 Oryctolagus cuniculus ENSOCUG00000022008 N 0.735
ENSLAFG00000029423 Loxodonta africana ENSLAFG00000029423 N 0.735
SF3B14 Gallus gallus ENSGALG00000016501 N 0.735
0610009D07Rik Mus musculus ENSMUSG00000037361 N 0.735
XM_001098393.1 Macaca mulatta ENSMMUG00000001282 N 0.735
ENSMGAG00000014057 Meleagris gallopavo ENSMGAG00000014057 N 0.735
ENSMLUG00000002473 Myotis lucifugus ENSMLUG00000002473 N 0.735
ENSTTRG00000013430 Tursiops truncatus ENSTTRG00000013430 N 0.735
SF3B14 Taeniopygia guttata ENSTGUG00000013191 N 0.735
ENSTSYG00000013978 Tarsius syrichta ENSTSYG00000013978 N 0.735
ENSGACG00000004803 Gasterosteus aculeatus ENSGACG00000004803 N 0.735
ENSVPAG00000005546 Vicugna pacos ENSVPAG00000005546 N 0.735
ENSTBEG00000012532 Tupaia belangeri ENSTBEG00000012532 N 0.735
ENSSSCG00000008587 Sus scrofa ENSSSCG00000008587 N 0.735
XM_515324.2 Pan troglodytes ENSPTRG00000011709 N 0.735
ENSPVAG00000011346 Pteropus vampyrus ENSPVAG00000011346 N 0.735
ENSSARG00000011902 Sorex araneus ENSSARG00000011902 N 0.735
ENSPPYG00000012603 Pongo pygmaeus ENSPPYG00000012603 N 0.735
ENSCHOG00000000689 Choloepus hoffmanni ENSCHOG00000000689 N 0.735
estExt_fgenesh1_pg.C_2760028 Capitella teleta estExt_fgenesh1_pg.C_2760028 N 0.735
GSPATP00004048001 Paramecium tetraurelia GSPATP00004048001 N 0.735
Q2KIQ7_BOVIN Bos taurus ENSBTAG00000003407 N 0.735
estExt_fgenesh2_kg.C_sca_670005 Lottia gigantea estExt_fgenesh2_kg.C_sca_670005 N 0.735
estExt_Genewise1.C_630098 Physcomitrella patens estExt_Genewise1.C_630098 N 0.735
AC008073.5 Homo sapiens ENSG00000115128 N 0.735
Ame_R001592 Ailuropoda melanoleuca Ame_R001592 N 0.735
XM_532889.2 Canis familiaris ENSCAFG00000003957 N 0.735
ENSACAG00000011677 Anolis carolinensis ENSACAG00000011677 N 0.735
ENSDNOG00000007148 Dasypus novemcinctus ENSDNOG00000007148 N 0.735
LOC100056247 Equus caballus ENSECAG00000015618 N 0.735
ENSFCAG00000004304 Felis catus ENSFCAG00000004304 N 0.735
sf3b14 Danio rerio ENSDARG00000009753 N 0.735
LOC100386467 Callithrix jacchus ENSCJAG00000007716 N 0.735
ENSCPOG00000008016 Cavia porcellus ENSCPOG00000008016 N 0.735
0610009D07Rik Dipodomys ordii ENSDORG00000009772 N 0.735
THAPSDRAFT_20086 Thalassiosira pseudonana Thaps20086 N 0.725
AT5G12190 Arabidopsis thaliana AT5G12190-TAIR-G N 0.725
XM_002873508.1 Arabidopsis lyrata scaffold_601250.1 N 0.725
Sjc_0071370 Schistosoma japonicum Sjc_0071370 N 0.721
68671 Helobdella robusta 68671 N 0.721
29868.m000351 Ricinus communis 29868.m000351 N 0.721
B9GG60_POPTR Populus trichocarpa POPTR_0001s28000 N 0.721
cassava30358.valid.m1 Manihot esculenta cassava30358.valid.m1 N 0.721
GSVIVG00037329001 Vitis vinifera GSVIVG00037329001 N 0.721
GSPATP00010032001 Paramecium tetraurelia GSPATP00010032001 N 0.721
Smp_032060 Schistosoma mansoni Smp_032060 N 0.721
PK21780.1 Cannabis sativa PK21780.1 N 0.721
XP_002160322.1 Hydra magnipapillata XP_002160322.1 N 0.721
ppa013407m Prunus persica ppa013407m N 0.721
ppa013405m Prunus persica ppa013405m N 0.721
ENSORLG00000015955 Oryzias latipes ENSORLG00000015955 N 0.721
MDP0000185506 Malus x domestica MDP0000185506 N 0.721
BRADI1G04240 Brachypodium distachyon BRADI1G04240 N 0.721
sf3b14 Xenopus tropicalis ENSXETG00000018204 N 0.721
LOAG_04189 Loa loa LOAG_04189 N 0.710
NCLIV_001260 Neospora caninum NCLIV_001260 N 0.710
TGME49_105010 Toxoplasma gondii TGME49_105010 N 0.710
TGVEG_106330 Toxoplasma gondii TGVEG_106330 N 0.710
TGGT1_042490 Toxoplasma gondii TGGT1_042490 N 0.710
160.m00066 Tetrahymena thermophila 160.m00066 N 0.710
SNAPOd2T00023714001 Oikopleura dioica SNAPOd2T00023714001 N 0.706
XM_001364269.1 Monodelphis domestica ENSMODG00000002144 N 0.706
Aqu1.214150 Amphimedon queenslandica Aqu1.214150 N 0.706
estExt_fgeneshCV_pm.C_140033 Chlorella vulgaris estExt_fgeneshCV_pm.C_140033 N 0.706
e_gw1.17.197.1 Volvox carteri e_gw1.17.197.1 N 0.706
AAH57709 Xenopus laevis AAH57709 N 0.706
estExt_Genemark1.C_140122 Coccomyxa C 169 estExt_Genemark1.C_140122 N 0.706
B9HNI9_POPTR Populus trichocarpa POPTR_0009s07180 N 0.706