Minc01156 (Meloidogyne incognita)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Minc01156 T57757_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Minc01156 RRM 22 89

Links

Other RRM family RBPs
Other Meloidogyne incognita RBPs

134 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PPA24922 Pristionchus pacificus PPA24922 N 0.912
LOAG_04189 Loa loa LOAG_04189 N 0.884
amel4_ncbi_hmm5835 Apis mellifera amel4_ncbi_hmm5835 N 0.882
DGIL_AUG5s10565g5t1 Acyrtosiphon pisum DGIL_AUG5s10565g5t1 N 0.882
nasonia_NCBI_hmm648054 Nasonia vitripennis nasonia_NCBI_hmm648054 N 0.882
amel4_ncbi_hmm5835 Tribolium castaneum amel4_ncbi_hmm5835 N 0.882
nasonia_NCBI_hmm146063 Nasonia vitripennis nasonia_NCBI_hmm146063 N 0.882
estExt_fgenesh2_kg.C_sca_670005 Lottia gigantea estExt_fgenesh2_kg.C_sca_670005 N 0.882
68671 Helobdella robusta 68671 N 0.882
ENSLAFG00000029423 Loxodonta africana ENSLAFG00000029423 N 0.868
SF3B14 Gallus gallus ENSGALG00000016501 N 0.868
ENSMGAG00000014057 Meleagris gallopavo ENSMGAG00000014057 N 0.868
ENSMLUG00000002473 Myotis lucifugus ENSMLUG00000002473 N 0.868
XM_001098393.1 Macaca mulatta ENSMMUG00000001282 N 0.868
ENSCPOG00000008016 Cavia porcellus ENSCPOG00000008016 N 0.868
AC008073.5 Homo sapiens ENSG00000115128 N 0.868
0610009D07Rik Dipodomys ordii ENSDORG00000009772 N 0.868
ENSDNOG00000007148 Dasypus novemcinctus ENSDNOG00000007148 N 0.868
LOC100056247 Equus caballus ENSECAG00000015618 N 0.868
ENSFCAG00000004304 Felis catus ENSFCAG00000004304 N 0.868
0610009D07Rik Mus musculus ENSMUSG00000037361 N 0.868
sf3b14 Danio rerio ENSDARG00000009753 N 0.868
ENSOCUG00000022008 Oryctolagus cuniculus ENSOCUG00000022008 N 0.868
ENSSSCG00000008587 Sus scrofa ENSSSCG00000008587 N 0.868
ENSSARG00000011902 Sorex araneus ENSSARG00000011902 N 0.868
ENSTBEG00000012532 Tupaia belangeri ENSTBEG00000012532 N 0.868
SF3B14 Taeniopygia guttata ENSTGUG00000013191 N 0.868
ENSVPAG00000005546 Vicugna pacos ENSVPAG00000005546 N 0.868
ENSPVAG00000011346 Pteropus vampyrus ENSPVAG00000011346 N 0.868
estExt_fgenesh1_pg.C_1580052 Nematostella vectensis estExt_fgenesh1_pg.C_1580052 N 0.868
ENSPPYG00000012603 Pongo pygmaeus ENSPPYG00000012603 N 0.868
ENSTTRG00000013430 Tursiops truncatus ENSTTRG00000013430 N 0.868
XM_515324.2 Pan troglodytes ENSPTRG00000011709 N 0.868
Ame_R001592 Ailuropoda melanoleuca Ame_R001592 N 0.868
LOC100386467 Callithrix jacchus ENSCJAG00000007716 N 0.868
ENSOANG00000007627 Ornithorhynchus anatinus ENSOANG00000007627 N 0.868
ENSTSYG00000013978 Tarsius syrichta ENSTSYG00000013978 N 0.868
CJA01433 Caenorhabditis japonica CJA01433 N 0.868
CBN08400 Caenorhabditis brenneri CBN08400 N 0.868
CBG06987 Caenorhabditis briggsae CBG06987 N 0.868
C50D2.5 Caenorhabditis elegans C50D2.5 N 0.868
ENSACAG00000011677 Anolis carolinensis ENSACAG00000011677 N 0.868
CRE22109 Caenorhabditis remanei CRE22109 N 0.868
ENSCHOG00000000689 Choloepus hoffmanni ENSCHOG00000000689 N 0.868
Q2KIQ7_BOVIN Bos taurus ENSBTAG00000003407 N 0.868
XM_532889.2 Canis familiaris ENSCAFG00000003957 N 0.868
estExt_GenewiseH_1.C_6800062 Branchiostoma floridae estExt_GenewiseH_1.C_6800062 N 0.853
ENSTNIG00000009719 Tetraodon nigroviridis ENSTNIG00000009719 N 0.853
AAEL005909 Aedes aegypti AAEL005909 N 0.853
ISCW024082 Ixodes scapularis ISCW024082 N 0.853
sf3b14 Xenopus tropicalis ENSXETG00000018204 N 0.853
ENSTRUG00000006551 Takifugu rubripes ENSTRUG00000006551 N 0.853
ENSORLG00000015955 Oryzias latipes ENSORLG00000015955 N 0.853
CpipJ_CPIJ008576 Culex pipiens CpipJ_CPIJ008576 N 0.853
PHUM617060 Pediculus humanus PHUM617060 N 0.853
CPIJ008576 Culex quinquefasciatus CPIJ008576 N 0.853
GF10910 Drosophila ananassae FBgn0087950 N 0.841
GG14070 Drosophila erecta FBgn0106332 N 0.841
GA12181-RA Drosophila pseudoobscura FBgn0072229 N 0.841
GE20495 Drosophila yakuba FBgn0068445 N 0.841
GI13232 Drosophila mojavensis FBgn0135989 N 0.841
GL22529 Drosophila persimilis FBgn0160121 N 0.841
GK17258 Drosophila willistoni FBgn0219257 N 0.841
estExt_fgenesh1_kg.C_20004 Daphnia pulex estExt_fgenesh1_kg.C_20004 N 0.841
GJ12004 Drosophila virilis FBgn0199256 N 0.841
GD13137 Drosophila simulans FBgn0184859 N 0.841
GM13852 Drosophila sechellia FBgn0168783 N 0.841
CG13298 Drosophila melanogaster FBgn0035692 N 0.841
GH16287 Drosophila grimshawi FBgn0123758 N 0.841
XM_001364269.1 Monodelphis domestica ENSMODG00000002144 N 0.838
Smp_032060 Schistosoma mansoni Smp_032060 N 0.838
Sjc_0071370 Schistosoma japonicum Sjc_0071370 N 0.838
AGAP002780 Anopheles gambiae AGAP002780 N 0.838
ENSGACG00000004803 Gasterosteus aculeatus ENSGACG00000004803 N 0.838
AAH57709 Xenopus laevis AAH57709 N 0.838
estExt_fgenesh1_pg.C_2760028 Capitella teleta estExt_fgenesh1_pg.C_2760028 N 0.824
ENSCSAVG00000008970 Ciona savignyi ENSCSAVG00000008970 N 0.809
ENSCING00000012689 Ciona intestinalis ENSCING00000012689 N 0.809
fgeneshTA2_pm.C_scaffold_21000029 Trichoplax adhaerens fgeneshTA2_pm.C_scaffold_21000029 N 0.797
e_gw1.13.49.1 Emiliania huxleyi e_gw1.13.49.1 N 0.797
ENSCHOG00000013886 Choloepus hoffmanni ENSCHOG00000013886 N 0.794
XP_002160322.1 Hydra magnipapillata XP_002160322.1 N 0.794
Aqu1.214150 Amphimedon queenslandica Aqu1.214150 N 0.779
SNAPOd2T00023714001 Oikopleura dioica SNAPOd2T00023714001 N 0.765
e_gw1.17.197.1 Volvox carteri e_gw1.17.197.1 N 0.765
Cucsa.086930 Cucumis sativus Cucsa.086930 N 0.754
BGIOSIBCE013412 Oryza indica BGIOSIBCE013412 N 0.750
estExt_Genewise1.C_630098 Physcomitrella patens estExt_Genewise1.C_630098 N 0.750
BRADI1G04240 Brachypodium distachyon BRADI1G04240 N 0.750
estExt_fgenesh2_pg.C_240194 Selaginella moellendorfii estExt_fgenesh2_pg.C_240194 N 0.750
DDB_G0286297 Dictyostelium discoideum DDB_G0286297 N 0.750
LOC_Os03g59710 Oryza sativa LOC_Os03g59710 N 0.750
Glyma02g44710.1 Glycine max Glyma02g44710.1 N 0.739
GP3.080340 Batrachochytrium dendrobatidis GP3.080340 N 0.739
Medtr5g096400 Medicago truncatula Medtr5g096400 N 0.739
estExt_fgeneshPB_pg.C_50297 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_50297 N 0.739
XM_002873508.1 Arabidopsis lyrata scaffold_601250.1 N 0.739
AT5G12190 Arabidopsis thaliana AT5G12190-TAIR-G N 0.739
chr2.CM0308.280.nc Lotus japonicus chr2.CM0308.280.nc N 0.739
Glyma14g04020.1 Glycine max Glyma14g04020.1 N 0.735
MDP0000185506 Malus x domestica MDP0000185506 N 0.735
GSVIVG00037329001 Vitis vinifera GSVIVG00037329001 N 0.735
GRMZM2G107745 Zea mays GRMZM2G107745 N 0.735
GRMZM2G358416 Zea mays GRMZM2G358416 N 0.735
ppa013407m Prunus persica ppa013407m N 0.735
PK21780.1 Cannabis sativa PK21780.1 N 0.735
SPRG_00106 Saprolegnia parasitica SPRG_00106 N 0.735
B9GG60_POPTR Populus trichocarpa POPTR_0001s28000 N 0.735
ppa013405m Prunus persica ppa013405m N 0.735
cassava30358.valid.m1 Manihot esculenta cassava30358.valid.m1 N 0.735
29868.m000351 Ricinus communis 29868.m000351 N 0.735
SB01G003790 Sorghum bicolor Sb01g003790 N 0.735
TA13725 Theileria annulata TA13725 N 0.735
PCHAS_144180 Plasmodium chabaudi PCHAS_144180 N 0.725
RO3G_04631 Rhizopus oryzae RO3G_04631 N 0.725
mgf016428m Mimulus guttatus mgf016428m N 0.725
fgeneshMC_pg.3_#_621 Mucor circinelloides fgeneshMC_pg.3_#_621 N 0.725
TP02_0539 Theileria parva TP02_0539 N 0.721
GSPATP00004048001 Paramecium tetraurelia GSPATP00004048001 N 0.721
estExt_GenewiseW_1.C_340090 Chlamydomonas reinhardtii estExt_GenewiseW_1.C_340090 N 0.721
B9HNI9_POPTR Populus trichocarpa POPTR_0009s07180 N 0.721
EDO06533.1 Babesia bovis EDO06533.1 N 0.721
s_454910 Phytophthora sojae s_454910 N 0.710
PITG_10282 Phytophthora infestans PITG_10282 N 0.710
estExt_fgenesh1_pg.C_130126 Phytophthora capsici estExt_fgenesh1_pg.C_130126 N 0.710
PBANKA_143980 Plasmodium berghei PBANKA_143980 N 0.710
GSPATP00010032001 Paramecium tetraurelia GSPATP00010032001 N 0.706
estExt_fgeneshCV_pm.C_140033 Chlorella vulgaris estExt_fgeneshCV_pm.C_140033 N 0.706
estExt_Genemark1.C_140122 Coccomyxa C 169 estExt_Genemark1.C_140122 N 0.706
PY07239 Plasmodium yoelii PY07239 N 0.706
PGTG_00327 Puccinia graminis PGTG_00327 N 0.706
CMU_001200 Cryptosporidium muris CMU_001200 N 0.706
estExt_Genewise1Plus.C_10491 Micromonas pusilla estExt_Genewise1Plus.C_10491 N 0.706
EuGene.00070081 Melampsora laricis populina EuGene.00070081 N 0.706