Aqu1.218342 (Amphimedon queenslandica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Aqu1.218342 T48987_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.218342 RRM 49 111
Aqu1.218342 RRM 159 224

Links

Other RRM family RBPs
Other Amphimedon queenslandica RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.791
XP_798746.1 Strongylocentrotus purpuratus XP_798746.1 I 0.783
XP_001180940.1 Strongylocentrotus purpuratus XP_001180940.1 I 0.783
estExt_fgenesh2_pg.C_920027 Branchiostoma floridae estExt_fgenesh2_pg.C_920027 I 0.744
SRSF5 Tetraodon nigroviridis ENSTNIG00000016411 I 0.721
amel4_ncbi_hmm6583 Apis mellifera amel4_ncbi_hmm6583 I 0.721
SRSF5 Takifugu rubripes ENSTRUG00000017811 I 0.721
estExt_fgenesh1_pg.C_3000025 Capitella teleta estExt_fgenesh1_pg.C_3000025 I 0.713
srsf5 Xenopus tropicalis ENSXETG00000002211 I 0.713
CpipJ_CPIJ008634 Culex pipiens CpipJ_CPIJ008634 I 0.713
CPIJ008634 Culex quinquefasciatus CPIJ008634 I 0.713
Sfrs5 Rattus norvegicus ENSRNOG00000005513 I 0.705
SRSF5 Pan troglodytes ENSPTRG00000006488 I 0.705
SRSF5 Ochotona princeps ENSOPRG00000008286 I 0.705
SRSF5 Otolemur garnettii ENSOGAG00000015122 I 0.705
SRSF5 Sus scrofa ENSSSCG00000002312 I 0.705
ENSPPYG00000005945 Pongo pygmaeus ENSPPYG00000005945 I 0.705
SRSF5 Vicugna pacos ENSVPAG00000006448 I 0.705
ISCW010321 Ixodes scapularis ISCW010321 I 0.705
PHUM290500 Pediculus humanus PHUM290500 I 0.705
SRSF5 Oryctolagus cuniculus ENSOCUG00000009274 I 0.705
SRSF5 Tursiops truncatus ENSTTRG00000003318 I 0.705
SRSF5 Tarsius syrichta ENSTSYG00000007786 I 0.705
SFRS5 Taeniopygia guttata ENSTGUG00000011425 I 0.705
SRSF5 Gorilla gorilla ENSGGOG00000016462 I 0.705
SRSF5 Canis familiaris ENSCAFG00000016589 I 0.705
A6MLI3_CALJA Callithrix jacchus ENSCJAG00000014884 I 0.705
SRSF5 Cavia porcellus ENSCPOG00000005949 I 0.705
A6H7B7_BOVIN Bos taurus ENSBTAG00000011596 I 0.705
SRSF5 Anolis carolinensis ENSACAG00000005143 I 0.705
Ame_R004936 Ailuropoda melanoleuca Ame_R004936 I 0.705
AGAP004592 Anopheles gambiae AGAP004592 I 0.705
srsf5b Danio rerio ENSDARG00000027734 I 0.705
srsf5a Danio rerio ENSDARG00000029818 I 0.705
SRSF5 Macaca mulatta ENSMMUG00000022407 I 0.705
SRSF5 Monodelphis domestica ENSMODG00000011362 I 0.705
SRSF5 Myotis lucifugus ENSMLUG00000011939 I 0.705
SRSF5 Homo sapiens ENSG00000100650 D 0.705
LOC100053264 Equus caballus ENSECAG00000026873 I 0.705
SRSF5 Felis catus ENSFCAG00000008848 I 0.705
Srsf5 Mus musculus ENSMUSG00000021134 I 0.705