estExt_fgenesh1_kg.C_20142 (Cochliobolus heterostrophus C5)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_kg.C_20142 T50410_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_20142 RRM 44 114

Links

Other RRM family RBPs
Other Cochliobolus heterostrophus C5 RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB00849.1 Alternaria brassicicola AB00849.1 N 0.944
EAT91924.1 Phaeosphaeria nodorum EAT91924.1 N 0.930
SNOG_00429 Stagonospora nodorum SNOG_00429 N 0.930
PTRG_10763 Pyrenophora tritici repentis PTRG_10763 N 0.887
estExt_fgenesh1_kg.C_130003 Mycosphaerella fijiensis estExt_fgenesh1_kg.C_130003 N 0.803
estExt_fgenesh1_kg.C_chr_10019 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_10019 N 0.761
BC1G_11068 Botrytis cinerea BC1G_11068 N 0.761
SS1G_12129 Sclerotinia sclerotiorum SS1G_12129 N 0.746
gw1.3.1887.1 Trichoderma virens gw1.3.1887.1 N 0.732
e_gww2.3.582.1 Phanerochaete chrysosporium e_gww2.3.582.1 N 0.718
GLRG_00505 Colletotrichum graminicola GLRG_00505 N 0.718
estExt_fgenesh2_kg.C_60460 Agaricus bisporus estExt_fgenesh2_kg.C_60460 I 0.718
gw1.23.298.1 Trichoderma reesei gw1.23.298.1 N 0.718
fgenesh1_pg.sca_1_chr1_3_0001239 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0001239 N 0.718
estExt_Genewise1Plus.C_110234 Trichoderma atroviride estExt_Genewise1Plus.C_110234 N 0.718
PK01699.1 Cannabis sativa PK01699.1 N 0.704
GSVIVG00026504001 Vitis vinifera GSVIVG00026504001 N 0.704
gww1.22.130.1 Laccaria bicolor gww1.22.130.1 I 0.704
e_gw1.1.1787.1 Tremella mesenterica e_gw1.1.1787.1 N 0.704
estExt_fgenesh2_kg.C_130331 Serpula lacrymans estExt_fgenesh2_kg.C_130331 I 0.704
CHGG_01938 Chaetomium globosum CHGG_01938 N 0.704
FGSG_04914 Fusarium graminearum FGSG_04914 N 0.704
e_gw1.4.2145.1 Cryphonectria parasitica e_gw1.4.2145.1 N 0.704
fgenesh1_pm.C_scaffold_6000172 Pleurotus ostreatus fgenesh1_pm.C_scaffold_6000172 I 0.704