estExt_Genewise1.C_7200001 (Capitella teleta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_7200001 T51304_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_7200001 RRM 9 78

Links

Other RRM family RBPs
Other Capitella teleta RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.800
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.786
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.786
THOC4 Gallus gallus ENSGALG00000007237 N 0.786
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.786
THOC4 Homo sapiens ENSG00000183684 N 0.786
THOC4 Echinops telfairi ENSETEG00000016596 N 0.786
tho4 Danio rerio ENSDARG00000077732 N 0.786
LOC100055097 Equus caballus ENSECAG00000018754 N 0.786
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.786
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.786
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.786
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.786
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.786
THOC4 Oryzias latipes ENSORLG00000012331 N 0.786
Thoc4 Mus musculus ENSMUSG00000025134 N 0.786
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.786
THOC4 Microcebus murinus ENSMICG00000017403 N 0.786
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.786
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.786
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.786
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.786
AAH92013 Xenopus laevis AAH92013 N 0.786
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.786
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.786
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.786
Q58EA2 Xenopus laevis Q58EA2 N 0.786
THOC4 Canis familiaris ENSCAFG00000005877 N 0.786
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.786
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.786
Q6GLW1 Xenopus laevis Q6GLW1 N 0.771
AAH74336 Xenopus laevis AAH74336 N 0.771
Refbp2 Mus musculus ENSMUSG00000060244 N 0.771
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.757
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.757
ISCW001860 Ixodes scapularis ISCW001860 N 0.757
AGAP006733 Anopheles gambiae AGAP006733 N 0.743
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.743
estExt_fgenesh1_pg.C_6740009 Capitella teleta estExt_fgenesh1_pg.C_6740009 N 0.743
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.743
PHUM023420 Pediculus humanus PHUM023420 N 0.743
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.743
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.729
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.729
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.729
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.729
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.729
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.729
gw1.3495.5.1 Capitella teleta gw1.3495.5.1 N 0.729
XP_782040.2 Strongylocentrotus purpuratus XP_782040.2 N 0.714
XP_001185635.1 Strongylocentrotus purpuratus XP_001185635.1 N 0.714
gw1.674.7.1 Capitella teleta gw1.674.7.1 N 0.714
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.714
AAEL005114 Aedes aegypti AAEL005114 N 0.714
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.714
AAEL015263 Aedes aegypti AAEL015263 N 0.714
nasonia_NCBI_hmm488134 Nasonia vitripennis nasonia_NCBI_hmm488134 N 0.714
GA10707-RA Drosophila pseudoobscura FBgn0070763 N 0.700
GL12678 Drosophila persimilis FBgn0150284 N 0.700
ENSORLG00000001620 Oryzias latipes ENSORLG00000001620 N 0.700