THOC4 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000008828 T42274_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000022188 RRM 115 184
ENSTRUP00000022189 RRM 86 155

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

102 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
THOC4 Oryzias latipes ENSORLG00000012331 N 0.914
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.900
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.900
LOC100055097 Equus caballus ENSECAG00000018754 N 0.886
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.886
THOC4 Homo sapiens ENSG00000183684 N 0.886
tho4 Danio rerio ENSDARG00000077732 N 0.886
THOC4 Echinops telfairi ENSETEG00000016596 N 0.886
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.886
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.886
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.886
THOC4 Canis familiaris ENSCAFG00000005877 N 0.886
THOC4 Gallus gallus ENSGALG00000007237 N 0.886
Q6GLW1 Xenopus laevis Q6GLW1 N 0.886
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.886
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.886
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.886
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.886
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.886
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.886
Thoc4 Mus musculus ENSMUSG00000025134 N 0.886
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.886
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.886
Q58EA2 Xenopus laevis Q58EA2 N 0.886
THOC4 Microcebus murinus ENSMICG00000017403 N 0.886
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.886
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.886
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.886
AAH92013 Xenopus laevis AAH92013 N 0.886
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.886
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.886
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.886
AAH74336 Xenopus laevis AAH74336 N 0.886
Refbp2 Mus musculus ENSMUSG00000060244 N 0.871
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.829
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.814
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.814
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.814
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.814
ENSMLUG00000007513 Myotis lucifugus ENSMLUG00000007513 N 0.814
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.800
ENSMLUG00000009247 Myotis lucifugus ENSMLUG00000009247 N 0.800
ENSMLUG00000009822 Myotis lucifugus ENSMLUG00000009822 N 0.800
ENSMLUG00000010127 Myotis lucifugus ENSMLUG00000010127 N 0.800
ENSMLUG00000013085 Myotis lucifugus ENSMLUG00000013085 N 0.800
ENSMLUG00000015043 Myotis lucifugus ENSMLUG00000015043 N 0.800
ENSMLUG00000016194 Myotis lucifugus ENSMLUG00000016194 N 0.800
ENSMLUG00000011599 Myotis lucifugus ENSMLUG00000011599 N 0.800
ENSMLUG00000002626 Myotis lucifugus ENSMLUG00000002626 N 0.800
ENSMLUG00000004992 Myotis lucifugus ENSMLUG00000004992 N 0.786
ENSMLUG00000004521 Myotis lucifugus ENSMLUG00000004521 N 0.786
ENSMLUG00000002669 Myotis lucifugus ENSMLUG00000002669 N 0.786
ENSMLUG00000008923 Myotis lucifugus ENSMLUG00000008923 N 0.786
ENSMLUG00000011212 Myotis lucifugus ENSMLUG00000011212 N 0.786
ENSMLUG00000013041 Myotis lucifugus ENSMLUG00000013041 N 0.786
ENSMLUG00000007634 Myotis lucifugus ENSMLUG00000007634 N 0.786
ENSMLUG00000015142 Myotis lucifugus ENSMLUG00000015142 N 0.786
ENSMLUG00000007617 Myotis lucifugus ENSMLUG00000007617 N 0.786
ISCW001860 Ixodes scapularis ISCW001860 N 0.786
ENSMLUG00000001244 Myotis lucifugus ENSMLUG00000001244 N 0.786
ENSMLUG00000001217 Myotis lucifugus ENSMLUG00000001217 N 0.786
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.786
ENSMLUG00000009447 Myotis lucifugus ENSMLUG00000009447 N 0.771
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.771
AGAP006733 Anopheles gambiae AGAP006733 N 0.771
ENSMLUG00000014480 Myotis lucifugus ENSMLUG00000014480 N 0.771
ENSMLUG00000010456 Myotis lucifugus ENSMLUG00000010456 N 0.771
AAEL015263 Aedes aegypti AAEL015263 N 0.771
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.771
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.771
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.771
AAEL005114 Aedes aegypti AAEL005114 N 0.771
ENSMLUG00000006641 Myotis lucifugus ENSMLUG00000006641 N 0.771
XP_001185635.1 Strongylocentrotus purpuratus XP_001185635.1 N 0.757
Gm5699 Mus musculus ENSMUSG00000087346 N 0.757
Gm5698 Mus musculus ENSMUSG00000086151 N 0.757
Smp_108820 Schistosoma mansoni Smp_108820 N 0.757
XP_782040.2 Strongylocentrotus purpuratus XP_782040.2 N 0.757
ENSMLUG00000010927 Myotis lucifugus ENSMLUG00000010927 N 0.757
GA10707-RA Drosophila pseudoobscura FBgn0070763 N 0.743
ENSMLUG00000008410 Myotis lucifugus ENSMLUG00000008410 N 0.743
ENSTNIG00000014136 Tetraodon nigroviridis ENSTNIG00000014136 N 0.743
GL12678 Drosophila persimilis FBgn0150284 N 0.743
ENSMLUG00000009449 Myotis lucifugus ENSMLUG00000009449 N 0.743
Aly Drosophila melanogaster FBgn0010774 N 0.729
aly Drosophila yakuba FBgn0068000 N 0.729
GG10124 Drosophila erecta FBgn0102435 N 0.729
nasonia_NCBI_hmm488134 Nasonia vitripennis nasonia_NCBI_hmm488134 N 0.729
GD19510 Drosophila simulans FBgn0191006 N 0.729
estExt_Genewise1.C_7200001 Capitella teleta estExt_Genewise1.C_7200001 N 0.729
PHUM023420 Pediculus humanus PHUM023420 N 0.729
GM10513 Drosophila sechellia FBgn0165460 N 0.729
GJ22697 Drosophila virilis FBgn0209801 N 0.714
GK12741 Drosophila willistoni FBgn0214750 N 0.714
GI23076 Drosophila mojavensis FBgn0145803 N 0.714
GF17326 Drosophila ananassae FBgn0094344 N 0.714
ENSCING00000013568 Ciona intestinalis ENSCING00000013568 N 0.714
GH18594 Drosophila grimshawi FBgn0126061 N 0.714
Q8MY63_CIOSA Ciona savignyi ENSCSAVG00000003324 N 0.700
ENSORLG00000001620 Oryzias latipes ENSORLG00000001620 N 0.700
Aqu1.225634 Amphimedon queenslandica Aqu1.225634 N 0.700