ENSGACG00000018178 (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000018178 T37559_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000024021 RRM 104 173
ENSGACP00000024024 RRM 104 173
ENSGACP00000024025 RRM 85 154

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

97 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH92013 Xenopus laevis AAH92013 N 0.871
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.871
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.871
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.871
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.871
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.871
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.871
Q58EA2 Xenopus laevis Q58EA2 N 0.871
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.871
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.871
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.871
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.871
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.871
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.871
Thoc4 Mus musculus ENSMUSG00000025134 N 0.871
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.871
THOC4 Microcebus murinus ENSMICG00000017403 N 0.871
THOC4 Homo sapiens ENSG00000183684 N 0.871
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.871
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.871
THOC4 Gallus gallus ENSGALG00000007237 N 0.871
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.871
LOC100055097 Equus caballus ENSECAG00000018754 N 0.871
THOC4 Echinops telfairi ENSETEG00000016596 N 0.871
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.871
THOC4 Canis familiaris ENSCAFG00000005877 N 0.871
tho4 Danio rerio ENSDARG00000077732 N 0.871
THOC4 Oryzias latipes ENSORLG00000012331 N 0.843
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.843
Q6GLW1 Xenopus laevis Q6GLW1 N 0.843
AAH74336 Xenopus laevis AAH74336 N 0.843
ENSORLG00000001620 Oryzias latipes ENSORLG00000001620 N 0.829
Refbp2 Mus musculus ENSMUSG00000060244 N 0.829
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.829
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.814
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.814
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.814
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.814
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.814
AGAP006733 Anopheles gambiae AGAP006733 N 0.786
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.786
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.786
ISCW001860 Ixodes scapularis ISCW001860 N 0.771
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.771
Gm5699 Mus musculus ENSMUSG00000087346 N 0.771
AAEL005114 Aedes aegypti AAEL005114 N 0.771
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.771
AAEL015263 Aedes aegypti AAEL015263 N 0.771
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.771
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.771
Gm5698 Mus musculus ENSMUSG00000086151 N 0.757
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.757
Smp_108820 Schistosoma mansoni Smp_108820 N 0.757
ENSTNIG00000014136 Tetraodon nigroviridis ENSTNIG00000014136 N 0.757
Aqu1.225634 Amphimedon queenslandica Aqu1.225634 N 0.743
ENSMLUG00000007513 Myotis lucifugus ENSMLUG00000007513 N 0.743
ENSMLUG00000002626 Myotis lucifugus ENSMLUG00000002626 N 0.729
estExt_Genewise1.C_7200001 Capitella teleta estExt_Genewise1.C_7200001 N 0.729
GA10707-RA Drosophila pseudoobscura FBgn0070763 N 0.729
GL12678 Drosophila persimilis FBgn0150284 N 0.729
XP_001185635.1 Strongylocentrotus purpuratus XP_001185635.1 N 0.714
XP_782040.2 Strongylocentrotus purpuratus XP_782040.2 N 0.714
nasonia_NCBI_hmm488134 Nasonia vitripennis nasonia_NCBI_hmm488134 N 0.714
fgeneshTA2_pg.C_scaffold_2000899 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_2000899 N 0.714
aly Drosophila yakuba FBgn0068000 N 0.714
ENSMLUG00000015043 Myotis lucifugus ENSMLUG00000015043 N 0.714
ENSMLUG00000010127 Myotis lucifugus ENSMLUG00000010127 N 0.714
GG10124 Drosophila erecta FBgn0102435 N 0.714
ENSMLUG00000016194 Myotis lucifugus ENSMLUG00000016194 N 0.714
Aly Drosophila melanogaster FBgn0010774 N 0.714
GM10513 Drosophila sechellia FBgn0165460 N 0.714
GD19510 Drosophila simulans FBgn0191006 N 0.714
ENSMLUG00000009822 Myotis lucifugus ENSMLUG00000009822 N 0.700
ENSMLUG00000009247 Myotis lucifugus ENSMLUG00000009247 N 0.700
ENSMLUG00000008923 Myotis lucifugus ENSMLUG00000008923 N 0.700
ENSMLUG00000007634 Myotis lucifugus ENSMLUG00000007634 N 0.700
ENSMLUG00000007617 Myotis lucifugus ENSMLUG00000007617 N 0.700
ENSMLUG00000001244 Myotis lucifugus ENSMLUG00000001244 N 0.700
ENSMLUG00000001217 Myotis lucifugus ENSMLUG00000001217 N 0.700
ENSMLUG00000002669 Myotis lucifugus ENSMLUG00000002669 N 0.700
ENSMLUG00000004521 Myotis lucifugus ENSMLUG00000004521 N 0.700
ENSMLUG00000004992 Myotis lucifugus ENSMLUG00000004992 N 0.700
Q8MY63_CIOSA Ciona savignyi ENSCSAVG00000003324 N 0.700
ENSMLUG00000013041 Myotis lucifugus ENSMLUG00000013041 N 0.700
XP_002155396.1 Hydra magnipapillata XP_002155396.1 N 0.700
GI23076 Drosophila mojavensis FBgn0145803 N 0.700
GJ22697 Drosophila virilis FBgn0209801 N 0.700
GK12741 Drosophila willistoni FBgn0214750 N 0.700
PHUM023420 Pediculus humanus PHUM023420 N 0.700
GH18594 Drosophila grimshawi FBgn0126061 N 0.700
GF17326 Drosophila ananassae FBgn0094344 N 0.700
ENSMLUG00000011212 Myotis lucifugus ENSMLUG00000011212 N 0.700
ENSMLUG00000011599 Myotis lucifugus ENSMLUG00000011599 N 0.700
97663 Helobdella robusta 97663 N 0.700
ENSMLUG00000013085 Myotis lucifugus ENSMLUG00000013085 N 0.700
ENSMLUG00000010456 Myotis lucifugus ENSMLUG00000010456 N 0.700