ISCW001860 (Ixodes scapularis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ISCW001860 T44816_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW001860-PA RRM 178 247

Links

Other RRM family RBPs
Other Ixodes scapularis RBPs

98 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.871
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.871
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.871
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.871
LOC100055097 Equus caballus ENSECAG00000018754 N 0.857
THOC4 Echinops telfairi ENSETEG00000016596 N 0.857
THOC4 Homo sapiens ENSG00000183684 N 0.857
tho4 Danio rerio ENSDARG00000077732 N 0.857
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.857
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.857
THOC4 Canis familiaris ENSCAFG00000005877 N 0.857
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.857
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.857
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.857
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.857
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.857
THOC4 Microcebus murinus ENSMICG00000017403 N 0.857
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.857
THOC4 Gallus gallus ENSGALG00000007237 N 0.857
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.857
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.857
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.857
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.857
Thoc4 Mus musculus ENSMUSG00000025134 N 0.857
AAH92013 Xenopus laevis AAH92013 N 0.857
Q58EA2 Xenopus laevis Q58EA2 N 0.857
THOC4 Oryzias latipes ENSORLG00000012331 N 0.857
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.857
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.857
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.857
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.857
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.857
AAH74336 Xenopus laevis AAH74336 N 0.843
AGAP006733 Anopheles gambiae AGAP006733 N 0.843
Q6GLW1 Xenopus laevis Q6GLW1 N 0.843
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.843
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.829
Refbp2 Mus musculus ENSMUSG00000060244 N 0.829
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.814
GL12678 Drosophila persimilis FBgn0150284 N 0.814
GA10707-RA Drosophila pseudoobscura FBgn0070763 N 0.814
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.814
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.800
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.800
AAEL015263 Aedes aegypti AAEL015263 N 0.800
AAEL005114 Aedes aegypti AAEL005114 N 0.800
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.800
XP_782040.2 Strongylocentrotus purpuratus XP_782040.2 N 0.786
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.786
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.786
XP_001185635.1 Strongylocentrotus purpuratus XP_001185635.1 N 0.786
aly Drosophila yakuba FBgn0068000 N 0.771
Aly Drosophila melanogaster FBgn0010774 N 0.771
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.771
GK12741 Drosophila willistoni FBgn0214750 N 0.771
GM10513 Drosophila sechellia FBgn0165460 N 0.771
GJ22697 Drosophila virilis FBgn0209801 N 0.771
GF17326 Drosophila ananassae FBgn0094344 N 0.771
GI23076 Drosophila mojavensis FBgn0145803 N 0.771
PHUM023420 Pediculus humanus PHUM023420 N 0.771
GH18594 Drosophila grimshawi FBgn0126061 N 0.771
GD19510 Drosophila simulans FBgn0191006 N 0.771
Aqu1.225634 Amphimedon queenslandica Aqu1.225634 N 0.771
GG10124 Drosophila erecta FBgn0102435 N 0.771
Gm5699 Mus musculus ENSMUSG00000087346 N 0.757
estExt_Genewise1.C_7200001 Capitella teleta estExt_Genewise1.C_7200001 N 0.757
ENSCING00000013568 Ciona intestinalis ENSCING00000013568 N 0.757
Q8MY63_CIOSA Ciona savignyi ENSCSAVG00000003324 N 0.757
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.743
ENSMLUG00000007513 Myotis lucifugus ENSMLUG00000007513 N 0.743
nasonia_NCBI_hmm488134 Nasonia vitripennis nasonia_NCBI_hmm488134 N 0.743
Gm5698 Mus musculus ENSMUSG00000086151 N 0.743
Smp_108820 Schistosoma mansoni Smp_108820 N 0.743
ENSMLUG00000010127 Myotis lucifugus ENSMLUG00000010127 N 0.729
ENSMLUG00000015043 Myotis lucifugus ENSMLUG00000015043 N 0.729
ENSMLUG00000002626 Myotis lucifugus ENSMLUG00000002626 N 0.729
ENSMLUG00000016194 Myotis lucifugus ENSMLUG00000016194 N 0.729
ENSMLUG00000004521 Myotis lucifugus ENSMLUG00000004521 N 0.714
ENSMLUG00000004992 Myotis lucifugus ENSMLUG00000004992 N 0.714
ENSMLUG00000007617 Myotis lucifugus ENSMLUG00000007617 N 0.714
ENSMLUG00000007634 Myotis lucifugus ENSMLUG00000007634 N 0.714
ENSMLUG00000002669 Myotis lucifugus ENSMLUG00000002669 N 0.714
ENSMLUG00000001244 Myotis lucifugus ENSMLUG00000001244 N 0.714
fgeneshTA2_pg.C_scaffold_2000899 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_2000899 N 0.714
ENSMLUG00000001217 Myotis lucifugus ENSMLUG00000001217 N 0.714
ENSMLUG00000014480 Myotis lucifugus ENSMLUG00000014480 N 0.714
ENSMLUG00000008923 Myotis lucifugus ENSMLUG00000008923 N 0.714
ENSMLUG00000013041 Myotis lucifugus ENSMLUG00000013041 N 0.714
ENSMLUG00000013085 Myotis lucifugus ENSMLUG00000013085 N 0.714
ENSMLUG00000011599 Myotis lucifugus ENSMLUG00000011599 N 0.714
ENSMLUG00000011212 Myotis lucifugus ENSMLUG00000011212 N 0.714
ENSMLUG00000009822 Myotis lucifugus ENSMLUG00000009822 N 0.714
Glyma11g15040.1 Glycine max Glyma11g15040.1 N 0.700
Glyma12g07010.1 Glycine max Glyma12g07010.1 N 0.700
ENSMLUG00000010456 Myotis lucifugus ENSMLUG00000010456 N 0.700
ENSMLUG00000009247 Myotis lucifugus ENSMLUG00000009247 N 0.700
ENSMLUG00000006641 Myotis lucifugus ENSMLUG00000006641 N 0.700
ENSMLUG00000010927 Myotis lucifugus ENSMLUG00000010927 N 0.700