XP_001185635.1 (Strongylocentrotus purpuratus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 XP_001185635.1 T58901_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001185635.1 RRM 122 191

Links

Other RRM family RBPs
Other Strongylocentrotus purpuratus RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_782040.2 Strongylocentrotus purpuratus XP_782040.2 N 1.000
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.843
AAH74336 Xenopus laevis AAH74336 N 0.829
Q6GLW1 Xenopus laevis Q6GLW1 N 0.829
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.814
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.814
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.814
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.814
THOC4 Gallus gallus ENSGALG00000007237 N 0.814
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.814
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.814
THOC4 Oryzias latipes ENSORLG00000012331 N 0.814
THOC4 Microcebus murinus ENSMICG00000017403 N 0.814
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.814
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.814
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.814
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.814
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.814
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.814
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.814
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.814
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.814
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.814
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.814
Thoc4 Mus musculus ENSMUSG00000025134 N 0.814
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.814
AAH92013 Xenopus laevis AAH92013 N 0.814
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.814
THOC4 Canis familiaris ENSCAFG00000005877 N 0.814
tho4 Danio rerio ENSDARG00000077732 N 0.814
LOC100055097 Equus caballus ENSECAG00000018754 N 0.814
THOC4 Homo sapiens ENSG00000183684 N 0.814
THOC4 Echinops telfairi ENSETEG00000016596 N 0.814
Q58EA2 Xenopus laevis Q58EA2 N 0.814
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.814
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.800
AAEL015263 Aedes aegypti AAEL015263 N 0.800
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.800
AAEL005114 Aedes aegypti AAEL005114 N 0.800
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.800
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.786
ISCW001860 Ixodes scapularis ISCW001860 N 0.786
AGAP006733 Anopheles gambiae AGAP006733 N 0.786
Refbp2 Mus musculus ENSMUSG00000060244 N 0.786
GL12678 Drosophila persimilis FBgn0150284 N 0.771
GI23076 Drosophila mojavensis FBgn0145803 N 0.771
GH18594 Drosophila grimshawi FBgn0126061 N 0.771
GD19510 Drosophila simulans FBgn0191006 N 0.771
GK12741 Drosophila willistoni FBgn0214750 N 0.771
GJ22697 Drosophila virilis FBgn0209801 N 0.771
GG10124 Drosophila erecta FBgn0102435 N 0.771
GM10513 Drosophila sechellia FBgn0165460 N 0.771
GA10707-RA Drosophila pseudoobscura FBgn0070763 N 0.771
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.771
GF17326 Drosophila ananassae FBgn0094344 N 0.771
Aly Drosophila melanogaster FBgn0010774 N 0.771
aly Drosophila yakuba FBgn0068000 N 0.771
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.757
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.757
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.757
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.757
PHUM023420 Pediculus humanus PHUM023420 N 0.743
estExt_Genewise1.C_7200001 Capitella teleta estExt_Genewise1.C_7200001 N 0.714
nasonia_NCBI_hmm488134 Nasonia vitripennis nasonia_NCBI_hmm488134 N 0.714
Q8MY63_CIOSA Ciona savignyi ENSCSAVG00000003324 N 0.714
ENSCING00000013568 Ciona intestinalis ENSCING00000013568 N 0.714
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.714
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.714
Aqu1.225634 Amphimedon queenslandica Aqu1.225634 N 0.700