Glyma01g15840.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma01g15840.1 T52579_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma01g15840.1 RRM 9 66

Links

Other RRM family RBPs
Other Glycine max RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma12g00500.1 Glycine max Glyma12g00500.1 I 0.864
Glyma09g36880.1 Glycine max Glyma09g36880.1 I 0.864
XM_002329131.1 Populus trichocarpa POPTR_0019s09640 N 0.820
B9I875_POPTR Populus trichocarpa POPTR_0013s09120 I 0.806
ppa009564m Prunus persica ppa009564m I 0.806
LjT28A08.70.nc Lotus japonicus LjT28A08.70.nc I 0.806
cassava6633.valid.m1 Manihot esculenta cassava6633.valid.m1 I 0.806
cassava6634.valid.m1 Manihot esculenta cassava6634.valid.m1 I 0.806
Medtr4g041420 Medicago truncatula Medtr4g041420 I 0.806
SB03G041530 Sorghum bicolor Sb03g041530 I 0.797
BGIOSIBCE004465 Oryza indica BGIOSIBCE004465 I 0.797
PDK_20s1420851g001 Phoenix dactylifera PDK_20s1420851g001 I 0.797
LOC_Os01g65550 Oryza sativa LOC_Os01g65550 I 0.797
GRMZM2G019266 Zea mays GRMZM2G019266 I 0.797
LOC_Os01g72834 Oryza sativa LOC_Os01g72834 N 0.793
BGIOSIBCE005068 Oryza indica BGIOSIBCE005068 N 0.793
GSVIVG00037134001 Vitis vinifera GSVIVG00037134001 I 0.790
MDP0000271231 Malus x domestica MDP0000271231 N 0.790
30170.m013735 Ricinus communis 30170.m013735 I 0.790
MDP0000181802 Malus x domestica MDP0000181802 N 0.790
BRADI2G56676 Brachypodium distachyon BRADI2G56676 I 0.780
GRMZM2G005236 Zea mays GRMZM2G005236 I 0.780
GSVIVG00013430001 Vitis vinifera GSVIVG00013430001 I 0.763
Cucsa.237790 Cucumis sativus Cucsa.237790 N 0.758
chr1.CM0150.310.nc Lotus japonicus chr1.CM0150.310.nc I 0.754
cassava39894.m1 Manihot esculenta cassava39894.m1 N 0.750
e_gw1.23.82.1 Selaginella moellendorfii e_gw1.23.82.1 I 0.746
SB03G046430 Sorghum bicolor Sb03g046430 N 0.746
AT1G22910 Arabidopsis thaliana AT1G22910-TAIR-G I 0.742
mgf002440m Mimulus guttatus mgf002440m N 0.726
XM_002893090.1 Arabidopsis lyrata fgenesh2_kg.1__2278__AT1G20880.1 I 0.712
cassava12008.valid.m1 Manihot esculenta cassava12008.valid.m1 N 0.705