PredSwiss_ASS2010_2420.1 (Pneumocystis carinii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PredSwiss_ASS2010_2420.1 T54637_0.6 Pneumocystis Genome Project (2010-Oct-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PredSwiss_ASS2010_2420.1 RRM 15 85
PredSwiss_ASS2010_2420.1 RRM 103 173

Links

Other RRM family RBPs
Other Pneumocystis carinii RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PredSwiss_CON266.4 Pneumocystis carinii PredSwiss_CON266.4 N 1.000
genemark.276_g Pleurotus ostreatus genemark.276_g N 0.741
GSTUMT00011313001 Tuber melanosporum GSTUMT00011313001 N 0.739
e_gw1.2.2306.1 Schizophyllum commune e_gw1.2.2306.1 I 0.727
CC1G_10837 Coprinopsis cinerea CC1G_10837 N 0.720
estExt_fgenesh2_pm.C_20717 Agaricus bisporus estExt_fgenesh2_pm.C_20717 N 0.720
e_gwh2.1.820.1 Phanerochaete chrysosporium e_gwh2.1.820.1 N 0.713
estExt_fgenesh1_kg.C_70028 Melampsora laricis populina estExt_fgenesh1_kg.C_70028 N 0.713
e_gw1.2.1555.1 Heterobasidion annosum e_gw1.2.1555.1 N 0.713
SOCG_01698 Schizosaccharomyces octosporus SOCG_01698 N 0.711
sap49 Schizosaccharomyces pombe SPAC31G5.01 N 0.711
estExt_Genewise1Plus.C_920074 Postia placenta estExt_Genewise1Plus.C_920074 I 0.706
estExt_Genewise1Plus.C_330054 Phycomyces blakesleeanus estExt_Genewise1Plus.C_330054 I 0.706
MGYG_06302 Microsporum gypseum MGYG_06302 N 0.704
ARB_04284 Arthroderma benhamiae ARB_04284 N 0.704
MCYG_05258 Microsporum canis MCYG_05258 N 0.704
TERG_06435 Trichophyton rubrum TERG_06435 N 0.704
TRV_00155 Trichophyton verrucosum TRV_00155 N 0.704