CC1G_10837 (Coprinopsis cinerea)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CC1G_10837 T28565_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CC1G_10837T0 RRM 14 84
CC1G_10837T0 RRM 101 172

Links

Other RRM family RBPs
Other Coprinopsis cinerea RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pm.C_20717 Agaricus bisporus estExt_fgenesh2_pm.C_20717 N 0.965
genemark.276_g Pleurotus ostreatus genemark.276_g N 0.965
e_gwh2.1.820.1 Phanerochaete chrysosporium e_gwh2.1.820.1 N 0.958
estExt_Genewise1Plus.C_920074 Postia placenta estExt_Genewise1Plus.C_920074 I 0.958
e_gw1.2.1555.1 Heterobasidion annosum e_gw1.2.1555.1 N 0.951
fgenesh2_kg.11_#_983_#_7076_1_CFOT Serpula lacrymans fgenesh2_kg.11_#_983_#_7076_1_CFOT N 0.944
estExt_GeneWisePlus_worm.C_60233 Laccaria bicolor estExt_GeneWisePlus_worm.C_60233 N 0.937
e_gw1.2.2306.1 Schizophyllum commune e_gw1.2.2306.1 I 0.923
estExt_fgenesh1_kg.C_70028 Melampsora laricis populina estExt_fgenesh1_kg.C_70028 N 0.839
e_gw1.6.467.1 Sporobolomyces roseus e_gw1.6.467.1 N 0.765
CNBG_4530 Cryptococcus neoformans CNBG_4530 N 0.762
SPPG_04182 Spizellomyces punctatus SPPG_04182 I 0.741
estExt_fgeneshTM_pm.C_30110 Tremella mesenterica estExt_fgeneshTM_pm.C_30110 N 0.734
estExt_Genewise1Plus.C_330054 Phycomyces blakesleeanus estExt_Genewise1Plus.C_330054 I 0.734
RO3G_10200 Rhizopus oryzae RO3G_10200 I 0.734
estExt_Genewise1Plus.C_150062 Mycosphaerella fijiensis estExt_Genewise1Plus.C_150062 N 0.727
estExt_Genewise1Plus.C_20198 Mucor circinelloides estExt_Genewise1Plus.C_20198 I 0.720
PredSwiss_CON266.4 Pneumocystis carinii PredSwiss_CON266.4 N 0.720
PredSwiss_ASS2010_2420.1 Pneumocystis carinii PredSwiss_ASS2010_2420.1 N 0.720
RO3G_15452 Rhizopus oryzae RO3G_15452 I 0.713