estExt_Genewise1Plus.C_920074 (Postia placenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_920074 T51516_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Smp_067420
M201_0.6 		Schistosoma mansoni DWWUUUU RNAcompete
Ray et al.(2013)
RNCMPT00232 		0.706
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_920074 RRM 14 84
estExt_Genewise1Plus.C_920074 RRM 101 172

Links

Other RRM family RBPs
Other Postia placenta RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.2.1555.1 Heterobasidion annosum e_gw1.2.1555.1 N 0.965
fgenesh2_kg.11_#_983_#_7076_1_CFOT Serpula lacrymans fgenesh2_kg.11_#_983_#_7076_1_CFOT N 0.958
CC1G_10837 Coprinopsis cinerea CC1G_10837 N 0.958
e_gwh2.1.820.1 Phanerochaete chrysosporium e_gwh2.1.820.1 N 0.951
estExt_fgenesh2_pm.C_20717 Agaricus bisporus estExt_fgenesh2_pm.C_20717 N 0.944
genemark.276_g Pleurotus ostreatus genemark.276_g N 0.944
estExt_GeneWisePlus_worm.C_60233 Laccaria bicolor estExt_GeneWisePlus_worm.C_60233 N 0.937
e_gw1.2.2306.1 Schizophyllum commune e_gw1.2.2306.1 I 0.930
estExt_fgenesh1_kg.C_70028 Melampsora laricis populina estExt_fgenesh1_kg.C_70028 N 0.839
SPPG_04182 Spizellomyces punctatus SPPG_04182 I 0.769
e_gw1.6.467.1 Sporobolomyces roseus e_gw1.6.467.1 N 0.765
estExt_Genewise1Plus.C_330054 Phycomyces blakesleeanus estExt_Genewise1Plus.C_330054 I 0.762
CNBG_4530 Cryptococcus neoformans CNBG_4530 N 0.734
estExt_Genewise1Plus.C_20198 Mucor circinelloides estExt_Genewise1Plus.C_20198 I 0.727
estExt_Genewise1Plus.C_150062 Mycosphaerella fijiensis estExt_Genewise1Plus.C_150062 N 0.727
estExt_fgeneshTM_pm.C_30110 Tremella mesenterica estExt_fgeneshTM_pm.C_30110 N 0.720
RO3G_10200 Rhizopus oryzae RO3G_10200 I 0.720
RO3G_15452 Rhizopus oryzae RO3G_15452 I 0.713
ISCW010601 Ixodes scapularis ISCW010601 I 0.706
PredSwiss_ASS2010_2420.1 Pneumocystis carinii PredSwiss_ASS2010_2420.1 N 0.706
PredSwiss_CON266.4 Pneumocystis carinii PredSwiss_CON266.4 N 0.706
Smp_067420 Schistosoma mansoni Smp_067420 D 0.706