CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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EDP41651.1
(
Malassezia globosa
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
EDP41651.1
T55978_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDP41651.1
RRM
188
258
VYVGRLPHGFFEDQLRAYFSQFGDINRLRLSRNKKTGRSKHYGFLEFDSPDVAEIVVDTMNNYLLDGHMLQ
Links
Other
RRM
family RBPs
Other
Malassezia globosa
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh2_kg.C_71062
Serpula lacrymans
estExt_fgenesh2_kg.C_71062
N
0.831
e_gw1.10.335.1
Mucor circinelloides
e_gw1.10.335.1
N
0.789
estExt_Genewise1Plus.C_30445
Agaricus bisporus
estExt_Genewise1Plus.C_30445
N
0.775
augustus-scaffold_1.g441
Schizophyllum commune
augustus-scaffold_1.g441
N
0.746
SOCG_03680
Schizosaccharomyces octosporus
SOCG_03680
N
0.746
CC1G_06273
Coprinopsis cinerea
CC1G_06273
N
0.732
genemark.9207_g
Pleurotus ostreatus
genemark.9207_g
N
0.718
fgenesh1_pm.00609_#_590
Aspergillus carbonarius
fgenesh1_pm.00609_#_590
N
0.718
eu2.Lbscf0011g04470
Laccaria bicolor
eu2.Lbscf0011g04470
N
0.718
PMAA_027560
Penicillium marneffei
PMAA_027560
N
0.718
ATEG_05588
Aspergillus terreus
CADATEAG00005000
N
0.718
An04g00680
Aspergillus niger
CADANGAG00003776
N
0.718
AFUA_4G06350
Aspergillus fumigatus
CADAFUAG00008260
N
0.718
GSTUMT00006382001
Tuber melanosporum
GSTUMT00006382001
N
0.704
e_gw1.87.91.1
Postia placenta
e_gw1.87.91.1
N
0.704
estExt_Genewise1Plus.C_200094
Postia placenta
estExt_Genewise1Plus.C_200094
N
0.704