CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_05588
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00005000
T33750_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00005000
RRM
223
293
VYVGRIPHGFYEHQMRAYFSQFGDITRLRLSRNRITGRSKHYAFIEFASTSVAKIVAGTMDNYLMYGHILK
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
48 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
An04g00680
Aspergillus niger
CADANGAG00003776
N
0.986
fgenesh1_pm.00609_#_590
Aspergillus carbonarius
fgenesh1_pm.00609_#_590
N
0.958
AFUA_4G06350
Aspergillus fumigatus
CADAFUAG00008260
N
0.944
AFLA_113610
Aspergillus flavus
CADAFLAG00005095
N
0.944
AO090023000955
Aspergillus oryzae
CADAORAG00008034
N
0.944
ACLA_045660
Aspergillus clavatus
CADACLAG00004652
N
0.930
ANIA_04346
Aspergillus nidulans
CADANIAG00006114
N
0.930
NFIA_109800
Neosartorya fischeri
CADNFIAG00009499
N
0.915
PMAA_027560
Penicillium marneffei
PMAA_027560
N
0.901
CIMG_04180
Coccidioides immitis
CIMG_04180
N
0.873
Pc22g17020
Penicillium chrysogenum
Pc22g17020
N
0.873
CPSG_03082
Coccidioides posadasii
CPSG_03082
N
0.873
PABG_04180
Paracoccidioides brasiliensis
PABG_04180
N
0.859
BDBG_06195
Blastomyces dermatitidis
BDBG_06195
N
0.845
MCYG_01275
Microsporum canis
MCYG_01275
N
0.845
MGYG_01823
Microsporum gypseum
MGYG_01823
N
0.845
TERG_07689
Trichophyton rubrum
TERG_07689
N
0.845
TEQG_06916
Trichophyton equinum
TEQG_06916
N
0.845
ARB_01674
Arthroderma benhamiae
ARB_01674
N
0.845
TESG_01475
Trichophyton tonsurans
TESG_01475
N
0.845
TRV_00034
Trichophyton verrucosum
TRV_00034
N
0.845
UREG_05625
Uncinocarpus reesii
UREG_05625
N
0.803
GSTUMT00006382001
Tuber melanosporum
GSTUMT00006382001
N
0.789
estExt_Genewise1Plus.C_200094
Postia placenta
estExt_Genewise1Plus.C_200094
N
0.789
e_gw1.87.91.1
Postia placenta
e_gw1.87.91.1
N
0.789
fgenesh1_pg.C_scaffold_4000265
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000265
N
0.789
CC1G_06273
Coprinopsis cinerea
CC1G_06273
N
0.775
estExt_Genewise1Plus.C_30445
Agaricus bisporus
estExt_Genewise1Plus.C_30445
N
0.761
augustus-scaffold_1.g441
Schizophyllum commune
augustus-scaffold_1.g441
N
0.732
e_gw1.10.335.1
Mucor circinelloides
e_gw1.10.335.1
N
0.732
SS1G_03893
Sclerotinia sclerotiorum
SS1G_03893
N
0.732
estExt_fgenesh2_kg.C_71062
Serpula lacrymans
estExt_fgenesh2_kg.C_71062
N
0.732
YALI0F14245g
Yarrowia lipolytica
YALI0F14245g
N
0.732
SPPG_07834
Spizellomyces punctatus
SPPG_07834
N
0.718
AMAG_03225
Allomyces macrogynus
AMAG_03225
N
0.718
EDP41651.1
Malassezia globosa
EDP41651.1
N
0.718
FGSG_04392
Fusarium graminearum
FGSG_04392
N
0.718
estExt_fgenesh1_pg.C_90140
Trichoderma atroviride
estExt_fgenesh1_pg.C_90140
N
0.718
gw1.11.934.1
Heterobasidion annosum
gw1.11.934.1
N
0.718
DEHA0A05764g
Debaryomyces hansenii
DEHA0A05764g
N
0.718
eu2.Lbscf0011g04470
Laccaria bicolor
eu2.Lbscf0011g04470
N
0.718
e_gw1.35.197.1
Physcomitrella patens
e_gw1.35.197.1
N
0.704
e_gw1.11.592.1
Nectria haematococca
e_gw1.11.592.1
N
0.704
SPCC1827.05c
Schizosaccharomyces pombe
SPCC1827.05c
N
0.704
gw1.11.214.1
Batrachochytrium dendrobatidis
gw1.11.214.1
N
0.704
BC1G_04453
Botrytis cinerea
BC1G_04453
N
0.704
fgenesh1_pg.C_scaffold_2000511
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_2000511
N
0.704
fgenesh1_pg.C_scaffold_1000567
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_1000567
N
0.704