An04g00680 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00003776 T33547_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00003687 RRM 221 291

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.986
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.972
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.944
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.944
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.930
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.930
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.930
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.915
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.901
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.873
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.873
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.873
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.859
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.859
MCYG_01275 Microsporum canis MCYG_01275 N 0.859
TEQG_06916 Trichophyton equinum TEQG_06916 N 0.859
TERG_07689 Trichophyton rubrum TERG_07689 N 0.859
TRV_00034 Trichophyton verrucosum TRV_00034 N 0.859
TESG_01475 Trichophyton tonsurans TESG_01475 N 0.859
ARB_01674 Arthroderma benhamiae ARB_01674 N 0.859
BDBG_06195 Blastomyces dermatitidis BDBG_06195 N 0.845
UREG_05625 Uncinocarpus reesii UREG_05625 N 0.803
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.789
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.789
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.789
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.789
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.775
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.761
SS1G_03893 Sclerotinia sclerotiorum SS1G_03893 N 0.732
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.732
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.732
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.732
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.732
EDP41651.1 Malassezia globosa EDP41651.1 N 0.718
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.718
FGSG_04392 Fusarium graminearum FGSG_04392 N 0.718
estExt_fgenesh1_pg.C_90140 Trichoderma atroviride estExt_fgenesh1_pg.C_90140 N 0.718
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.718
eu2.Lbscf0011g04470 Laccaria bicolor eu2.Lbscf0011g04470 N 0.718
gw1.11.934.1 Heterobasidion annosum gw1.11.934.1 N 0.718
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.718
SPCC1827.05c Schizosaccharomyces pombe SPCC1827.05c N 0.704
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.704
gw1.11.214.1 Batrachochytrium dendrobatidis gw1.11.214.1 N 0.704
e_gw1.11.592.1 Nectria haematococca e_gw1.11.592.1 N 0.704
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.704
fgenesh1_pg.C_scaffold_2000511 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2000511 N 0.704
BC1G_04453 Botrytis cinerea BC1G_04453 N 0.704