fgenesh1_pm.00609_#_590 (Aspergillus carbonarius)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.00609_#_590 T56583_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.00609_#_590 RRM 223 293

Links

Other RRM family RBPs
Other Aspergillus carbonarius RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
An04g00680 Aspergillus niger CADANGAG00003776 N 0.972
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.958
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.930
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.930
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.915
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.915
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.901
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.901
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.887
TEQG_06916 Trichophyton equinum TEQG_06916 N 0.859
ARB_01674 Arthroderma benhamiae ARB_01674 N 0.859
TERG_07689 Trichophyton rubrum TERG_07689 N 0.859
TESG_01475 Trichophyton tonsurans TESG_01475 N 0.859
TRV_00034 Trichophyton verrucosum TRV_00034 N 0.859
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.859
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.859
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.859
MCYG_01275 Microsporum canis MCYG_01275 N 0.845
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.845
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.845
BDBG_06195 Blastomyces dermatitidis BDBG_06195 N 0.831
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.803
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.789
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.789
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.789
UREG_05625 Uncinocarpus reesii UREG_05625 N 0.789
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.775
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.761
SS1G_03893 Sclerotinia sclerotiorum SS1G_03893 N 0.746
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.746
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.746
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.732
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.732
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.732
EDP41651.1 Malassezia globosa EDP41651.1 N 0.718
gw1.11.934.1 Heterobasidion annosum gw1.11.934.1 N 0.718
SOCG_03680 Schizosaccharomyces octosporus SOCG_03680 N 0.718
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.718
fgenesh1_pg.C_scaffold_2000511 Cryphonectria parasitica fgenesh1_pg.C_scaffold_2000511 N 0.718
SPCC1827.05c Schizosaccharomyces pombe SPCC1827.05c N 0.718
eu2.Lbscf0011g04470 Laccaria bicolor eu2.Lbscf0011g04470 N 0.718
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.718
FOXG_13842 Fusarium oxysporum FOXG_13842 N 0.704
FGSG_04392 Fusarium graminearum FGSG_04392 N 0.704
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.704
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.704
gw1.11.214.1 Batrachochytrium dendrobatidis gw1.11.214.1 N 0.704
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.704
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.704
estExt_fgenesh1_pg.C_90140 Trichoderma atroviride estExt_fgenesh1_pg.C_90140 N 0.704
FVEG_11271 Fusarium verticillioides FVEG_11271 N 0.704