fgenesh1_pg.C_scaffold_2000511 (Cryphonectria parasitica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.C_scaffold_2000511 T56557_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_2000511 RRM 331 401

Links

Other RRM family RBPs
Other Cryphonectria parasitica RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_90140 Trichoderma atroviride estExt_fgenesh1_pg.C_90140 N 0.831
e_gw1.1.997.1 Trichoderma reesei e_gw1.1.997.1 N 0.817
e_gw1.17.425.1 Trichoderma virens e_gw1.17.425.1 N 0.817
FOXG_13842 Fusarium oxysporum FOXG_13842 N 0.789
FVEG_11271 Fusarium verticillioides FVEG_11271 N 0.789
FGSG_04392 Fusarium graminearum FGSG_04392 N 0.789
e_gw1.11.592.1 Nectria haematococca e_gw1.11.592.1 N 0.761
GLRG_08650 Colletotrichum graminicola GLRG_08650 N 0.761
BDBG_06195 Blastomyces dermatitidis BDBG_06195 N 0.746
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.746
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.718
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.718
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.718
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.704
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.704
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.704
An04g00680 Aspergillus niger CADANGAG00003776 N 0.704
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.704