SJAG_01064 (Schizosaccharomyces japonicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SJAG_01064 T30530_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SJAG_01064T0 RRM 34 104

Links

Other RRM family RBPs
Other Schizosaccharomyces japonicus RBPs

83 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.859
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.845
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.831
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.831
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.831
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.817
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.817
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.817
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.803
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.803
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.803
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.803
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.803
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.803
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.803
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.803
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.803
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.803
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.789
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.789
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.789
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.789
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.789
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.789
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.789
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.789
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.789
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.789
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.789
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.789
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.789
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.789
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.789
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.789
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.789
NCU00210 Neurospora crassa NCU00210 N 0.789
An12g03930 Aspergillus niger CADANGAG00009835 N 0.789
MCYG_04468 Microsporum canis MCYG_04468 N 0.789
TERG_03424 Trichophyton rubrum TERG_03424 N 0.789
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.789
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.775
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.775
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.775
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.761
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.761
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.761
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.761
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.761
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.746
PGTG_01720 Puccinia graminis PGTG_01720 N 0.746
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.746
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.740
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.732
ACLA_080400 Aspergillus clavatus CADACLAG00007885 N 0.732
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.732
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.732
gw1.1.2136.1 Pleurotus ostreatus gw1.1.2136.1 N 0.727
estExt_Genewise1_worm.C_60324 Laccaria bicolor estExt_Genewise1_worm.C_60324 N 0.727
estExt_fgenesh2_kg.C_120041 Serpula lacrymans estExt_fgenesh2_kg.C_120041 N 0.727
CHGG_03355 Chaetomium globosum CHGG_03355 N 0.722
FOXG_09405 Fusarium oxysporum FOXG_09405 N 0.722
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.718
PHUM535920 Pediculus humanus PHUM535920 N 0.718
LOAG_03270 Loa loa LOAG_03270 N 0.718
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.718
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.718
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.718
KLTH0H05214g Kluyveromyces thermotolerans KLTH0H05214g N 0.718
e_gw1.121.83.1 Postia placenta e_gw1.121.83.1 N 0.714
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.704
PK11911.1 Cannabis sativa PK11911.1 N 0.704
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.704
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.704
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.704
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.704
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.704
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.704
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.704
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.704
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.704
Bm1_02935 Brugia malayi Bm1_02935 N 0.704
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.704
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.701