XP_002160076.1 (Hydra magnipapillata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 XP_002160076.1 T59062_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_002160076.1 RRM 30 100

Links

Other RRM family RBPs
Other Hydra magnipapillata RBPs

113 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.958
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.845
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.845
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.845
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.845
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.845
NCBP2 Equus caballus ENSECAG00000016153 N 0.845
NCBP2 Homo sapiens ENSG00000114503 N 0.845
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.845
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.845
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.845
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.845
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.845
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.845
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.845
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.845
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.845
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.845
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.845
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.845
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.845
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.845
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.845
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.845
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.845
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.831
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.831
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.831
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.831
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.831
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.831
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.831
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.831
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.831
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.817
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.817
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.817
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.817
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.817
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.817
NCBP2 Gallus gallus ENSGALG00000006843 N 0.817
P52299 Xenopus laevis P52299 N 0.803
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.803
PHUM535920 Pediculus humanus PHUM535920 N 0.803
AAH72902 Xenopus laevis AAH72902 N 0.803
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.803
LOAG_03270 Loa loa LOAG_03270 N 0.803
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.803
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.803
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.803
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.803
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.789
CAA59259 Xenopus laevis CAA59259 N 0.789
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.789
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.789
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.789
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.789
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.789
Bm1_02935 Brugia malayi Bm1_02935 N 0.789
2118330B Xenopus laevis 2118330B N 0.789
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.789
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.775
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.775
NCBP2 Sorex araneus ENSSARG00000014294 N 0.775
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.775
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.775
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.775
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.775
91084 Helobdella robusta 91084 N 0.775
ncbp2 Danio rerio ENSDARG00000014898 N 0.761
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.761
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.761
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.761
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.746
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.746
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.746
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.746
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.746
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.746
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.746
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.746
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.732
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.732
Kwal_11096 Kluyveromyces waltii Kwal_11096 N 0.718
KLTH0H05214g Kluyveromyces thermotolerans KLTH0H05214g N 0.718
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.718
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.718
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.718
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.718
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.718
GJ23276 Drosophila virilis FBgn0210378 N 0.718
GG22670 Drosophila erecta FBgn0114835 N 0.718
GH15101 Drosophila grimshawi FBgn0122576 N 0.718
GI23717 Drosophila mojavensis FBgn0146442 N 0.718
GF16759 Drosophila ananassae FBgn0093780 N 0.718
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.718
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.718
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.718
Cbp20 Drosophila melanogaster FBgn0022943 N 0.718
GM15280 Drosophila sechellia FBgn0170200 N 0.718
GL12592 Drosophila persimilis FBgn0150198 N 0.718
GE25514 Drosophila yakuba FBgn0242580 N 0.718
GJ18756 Drosophila virilis FBgn0205908 N 0.718
GK11244 Drosophila willistoni FBgn0213255 N 0.718
GD19204 Drosophila simulans FBgn0190709 N 0.718
Minc02990 Meloidogyne incognita Minc02990 N 0.704
Minc06129 Meloidogyne incognita Minc06129 N 0.704
e_gw1.1.927.1 Trichoplax adhaerens e_gw1.1.927.1 N 0.704
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.704
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.704
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.704
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.704
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.704