MDP0000155814 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000155814 T57357_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000155814 RRM 116 187
MDP0000155814 RRM 217 265

Links

Other RRM family RBPs
Other Malus x domestica RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa009298m Prunus persica ppa009298m N 0.801
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.766
POPTR_0012s02890 Populus trichocarpa POPTR_0012s02890 N 0.760
cassava45236.m1 Manihot esculenta cassava45236.m1 N 0.748
chr3.LjT02L14.110.nd Lotus japonicus chr3.LjT02L14.110.nd N 0.746
Glyma15g40060.1 Glycine max Glyma15g40060.1 N 0.745
B9IDI5_POPTR Populus trichocarpa POPTR_0015s00770 N 0.742
LOC_Os02g14760 Oryza sativa LOC_Os02g14760 N 0.740
PK28889.1 Cannabis sativa PK28889.1 N 0.738
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.738
Glyma08g18810.1 Glycine max Glyma08g18810.1 N 0.730
B9GIT2_POPTR Populus trichocarpa POPTR_0001s45290 N 0.726
29650.m000268 Ricinus communis 29650.m000268 N 0.723
Sb04g008740 Sorghum bicolor Sb04g008740 N 0.721
chr3.CM0059.50.nd Lotus japonicus chr3.CM0059.50.nd N 0.716
cassava23842.valid.m1 Manihot esculenta cassava23842.valid.m1 N 0.702
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.702