e_gw1.30.357.1 (Selaginella moellendorfii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.30.357.1 T49933_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
e_gw1.81.40.1
M185_0.6 		Physcomitrella patens RACCUW RNAcompete
Ray et al.(2013)
RNCMPT00206 		0.856
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.30.357.1 RRM 20 76
e_gw1.30.357.1 RRM 117 181
e_gw1.30.357.1 RRM 250 311

Links

Other RRM family RBPs
Other Selaginella moellendorfii RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.81.40.1 Physcomitrella patens e_gw1.81.40.1 D 0.856
gw1.326.8.1 Physcomitrella patens gw1.326.8.1 I 0.856
GSVIVG00011438001 Vitis vinifera GSVIVG00011438001 I 0.829
chr1.CM0141.270.nc Lotus japonicus chr1.CM0141.270.nc I 0.828
cassava3019.m1 Manihot esculenta cassava3019.m1 I 0.824
Glyma18g49580.1 Glycine max Glyma18g49580.1 I 0.823
PDK_20s1513061g004 Phoenix dactylifera PDK_20s1513061g004 I 0.819
Glyma09g37080.1 Glycine max Glyma09g37080.1 I 0.818
28649.m000223 Ricinus communis 28649.m000223 I 0.817
ppa004961m Prunus persica ppa004961m I 0.813
A9PHS8_POPTR Populus trichocarpa POPTR_0004s12210 I 0.807
GSVIVG00028703001 Vitis vinifera GSVIVG00028703001 I 0.807
PK14390.1 Cannabis sativa PK14390.1 I 0.802
MDP0000796160 Malus x domestica MDP0000796160 I 0.802
ppa005791m Prunus persica ppa005791m I 0.797
Glyma14g30490.1 Glycine max Glyma14g30490.1 I 0.797
Cucsa.202010 Cucumis sativus Cucsa.202010 I 0.797
Glyma06g13130.1 Glycine max Glyma06g13130.1 I 0.797
30169.m006527 Ricinus communis 30169.m006527 I 0.797
XM_002884247.1 Arabidopsis lyrata scaffold_300118.1 I 0.796
Medtr3g124540 Medicago truncatula Medtr3g124540 I 0.793
Glyma04g41660.1 Glycine max Glyma04g41660.1 I 0.791
LOC_Os03g25980 Oryza sativa LOC_Os03g25980 I 0.791
B9IK00_POPTR Populus trichocarpa POPTR_0017s12160 I 0.786
cassava29285.valid.m1 Manihot esculenta cassava29285.valid.m1 I 0.786
Glyma13g08170.1 Glycine max Glyma13g08170.1 I 0.786
cassava7219.valid.m1 Manihot esculenta cassava7219.valid.m1 I 0.786
cassava7218.valid.m1 Manihot esculenta cassava7218.valid.m1 I 0.786
BRADI1G61200 Brachypodium distachyon BRADI1G61200 I 0.786
PTB Arabidopsis thaliana AT3G01150-TAIR-G I 0.786
mgf005649m Mimulus guttatus mgf005649m I 0.782
ATPTB2 Arabidopsis thaliana AT5G53180-TAIR-G I 0.781
XM_002865910.1 Arabidopsis lyrata fgenesh2_kg.8__1206__AT5G53180.1 I 0.775
LOC_Os08g33830 Oryza sativa LOC_Os08g33830 I 0.774
MDP0000269393 Malus x domestica MDP0000269393 I 0.770
SB03G028150 Sorghum bicolor Sb03g028150 I 0.769
LOC_Os01g43170 Oryza sativa LOC_Os01g43170 I 0.768
SB01G034060 Sorghum bicolor Sb01g034060 I 0.766
SB07G021250 Sorghum bicolor Sb07g021250 I 0.763
GRMZM2G178169 Zea mays GRMZM2G178169 I 0.763
GRMZM2G058039 Zea mays GRMZM2G058039 I 0.755
BRADI3G36770 Brachypodium distachyon BRADI3G36770 I 0.749
BGIOSIBCE011312 Oryza indica BGIOSIBCE011312 I 0.747
BRADI2G43760 Brachypodium distachyon BRADI2G43760 I 0.747
mgf001230m Mimulus guttatus mgf001230m I 0.745
MDP0000236223 Malus x domestica MDP0000236223 N 0.710