XP_001194199.1 (Strongylocentrotus purpuratus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 XP_001194199.1 T58954_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM8A
M054_0.6 		Homo sapiens RYGCGCB RNAcompete
Ray et al.(2013)
RNCMPT00056 		0.775
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001194199.1 RRM 75 145

Links

Other RRM family RBPs
Other Strongylocentrotus purpuratus RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_792124.1 Strongylocentrotus purpuratus XP_792124.1 I 1.000
ENSPCAG00000002146 Procavia capensis ENSPCAG00000002146 I 0.789
RBM8A Otolemur garnettii ENSOGAG00000000202 I 0.775
RBM8A Oryctolagus cuniculus ENSOCUG00000025693 I 0.775
B020018G12Rik Mus musculus ENSMUSG00000078184 I 0.775
RBM8A Monodelphis domestica ENSMODG00000018752 I 0.775
ENSPPYG00000000929 Pongo pygmaeus ENSPPYG00000000929 I 0.775
RBM8A Macaca mulatta ENSMMUG00000016051 I 0.775
RBM8A Pan troglodytes ENSPTRG00000001201 I 0.775
RBM8A Tursiops truncatus ENSTTRG00000009081 I 0.775
Ame_R013073 Ailuropoda melanoleuca Ame_R013073 I 0.775
RBM8A Sus scrofa ENSSSCG00000006684 I 0.775
RBM8A Sorex araneus ENSSARG00000013289 I 0.775
RBM8A Pteropus vampyrus ENSPVAG00000014471 I 0.775
Rbm8a Rattus norvegicus ENSRNOG00000021215 I 0.775
ENSLAFG00000021886 Loxodonta africana ENSLAFG00000021886 I 0.775
Rbm8a Mus musculus ENSMUSG00000038374 I 0.775
RBM8A Cavia porcellus ENSCPOG00000022453 I 0.775
LOC100399389 Callithrix jacchus ENSCJAG00000002209 I 0.775
RBM8A Canis familiaris ENSCAFG00000023172 I 0.775
RBM8A Gorilla gorilla ENSGGOG00000005422 I 0.775
Q6DTK7_HORSE Equus caballus ENSECAG00000022024 I 0.775
RBM8A_BOVIN Bos taurus ENSBTAG00000008369 I 0.775
RBM8A Homo sapiens ENSG00000131795 D 0.775
RBM8A Felis catus ENSFCAG00000005412 I 0.775
ENSETEG00000017932 Echinops telfairi ENSETEG00000017932 I 0.775
e_gw1.53.304.1 Lottia gigantea e_gw1.53.304.1 I 0.761
estExt_fgenesh2_pg.C_4600002 Branchiostoma floridae estExt_fgenesh2_pg.C_4600002 I 0.761
RBM8A Macropus eugenii ENSMEUG00000016058 I 0.761
e_gw.589.3.1 Branchiostoma floridae e_gw.589.3.1 I 0.761
rbm8a Danio rerio ENSDARG00000016516 I 0.761
RBM8A Spermophilus tridecemlineatus ENSSTOG00000013917 I 0.746
RBM8A Takifugu rubripes ENSTRUG00000013173 I 0.732
RBM8A Tetraodon nigroviridis ENSTNIG00000006869 I 0.732
B5FZD1_TAEGU Taeniopygia guttata ENSTGUG00000004447 I 0.732
RBM8A Gasterosteus aculeatus ENSGACG00000013157 I 0.732
estExt_Genewise1.C_210127 Daphnia pulex estExt_Genewise1.C_210127 I 0.718
Q8JJC6_ORYLA Oryzias latipes ENSORLG00000016263 I 0.718
AAG27092 Xenopus laevis AAG27092 I 0.704
AAH73361 Xenopus laevis AAH73361 I 0.704
Q9DF42 Xenopus laevis Q9DF42 I 0.704
Q6PH90 Xenopus laevis Q6PH90 I 0.704
AAH56659 Xenopus laevis AAH56659 I 0.704