BGIOSIBCE028833 (Oryza indica)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 BGIOSIBCE028833 T61949_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE028833 YTH 1 75

Links

Other YTH family RBPs
Other Oryza indica RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE028829 Oryza indica BGIOSIBCE028829 N 0.824
LOC_Os08g44200 Oryza sativa LOC_Os08g44200 N 0.824
Medtr4g163280 Medicago truncatula Medtr4g163280 N 0.813
GRMZM2G025488 Zea mays GRMZM2G025488 N 0.813
SB07G024500 Sorghum bicolor Sb07g024500 N 0.802
BRADI3G42640 Brachypodium distachyon BRADI3G42640 N 0.780
ECT5 Arabidopsis thaliana AT3G13060-TAIR-G N 0.736
XM_002882758.1 Arabidopsis lyrata fgenesh2_kg.3__1376__AT3G13060.2 N 0.736
SB07G006330 Sorghum bicolor Sb07g006330 N 0.725
BGIOSIBCE026930 Oryza indica BGIOSIBCE026930 N 0.725
LOC_Os08g12760 Oryza sativa LOC_Os08g12760 N 0.725
GRMZM2G442195 Zea mays GRMZM2G442195 N 0.714
BGIOSIBCE016517 Oryza indica BGIOSIBCE016517 N 0.705
MDP0000617859 Malus x domestica MDP0000617859 N 0.703
MDP0000405927 Malus x domestica MDP0000405927 N 0.703
cassava1917.valid.m1 Manihot esculenta cassava1917.valid.m1 N 0.703
B9N5D4_POPTR Populus trichocarpa POPTR_0014s00320 N 0.703
B9HG69_POPTR Populus trichocarpa POPTR_0007s15150 N 0.703
cassava1916.valid.m1 Manihot esculenta cassava1916.valid.m1 N 0.703
BRADI3G18190 Brachypodium distachyon BRADI3G18190 N 0.703
cassava1918.valid.m1 Manihot esculenta cassava1918.valid.m1 N 0.703
MDP0000287088 Malus x domestica MDP0000287088 N 0.703