GRMZM2G056573 (Zea mays)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 GRMZM2G056573 T62436_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G056573_P01 YTH 371 461

Links

Other YTH family RBPs
Other Zea mays RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G098174 Zea mays GRMZM2G098174 N 0.956
SB07G000670 Sorghum bicolor Sb07g000670 N 0.923
BRADI2G12380 Brachypodium distachyon BRADI2G12380 N 0.879
LOC_Os01g22630 Oryza sativa LOC_Os01g22630 N 0.879
BRADI1G64100 Brachypodium distachyon BRADI1G64100 N 0.725
XM_002894050.1 Arabidopsis lyrata fgenesh2_kg.1__3903__AT1G48110.2 N 0.725
LOC_Os03g20180 Oryza sativa LOC_Os03g20180 N 0.725
cassava30728.valid.m1 Manihot esculenta cassava30728.valid.m1 N 0.725
cassava30727.valid.m1 Manihot esculenta cassava30727.valid.m1 N 0.725
BGIOSIBCE010884 Oryza indica BGIOSIBCE010884 N 0.725
ECT7 Arabidopsis thaliana AT1G48110-TAIR-G N 0.725
cassava30729.valid.m1 Manihot esculenta cassava30729.valid.m1 N 0.725
cassava35662.valid.m1 Manihot esculenta cassava35662.valid.m1 N 0.714
Medtr8g134440 Medicago truncatula Medtr8g134440 N 0.714
cassava35657.valid.m1 Manihot esculenta cassava35657.valid.m1 N 0.714
cassava35663.valid.m1 Manihot esculenta cassava35663.valid.m1 N 0.714
cassava35660.valid.m1 Manihot esculenta cassava35660.valid.m1 N 0.714
cassava35665.valid.m1 Manihot esculenta cassava35665.valid.m1 N 0.714
cassava35659.valid.m1 Manihot esculenta cassava35659.valid.m1 N 0.714
cassava35661.valid.m1 Manihot esculenta cassava35661.valid.m1 N 0.714
chr6.LjT36O06.80.nd Lotus japonicus chr6.LjT36O06.80.nd N 0.714
cassava38867.m1 Manihot esculenta cassava38867.m1 N 0.714
ECT3 Arabidopsis thaliana AT5G61020-TAIR-G N 0.714
cassava35666.valid.m1 Manihot esculenta cassava35666.valid.m1 N 0.714
cassava38866.m1 Manihot esculenta cassava38866.m1 N 0.714
cassava35667.valid.m1 Manihot esculenta cassava35667.valid.m1 N 0.714
cassava35658.valid.m1 Manihot esculenta cassava35658.valid.m1 N 0.714
cassava42993.valid.m1 Manihot esculenta cassava42993.valid.m1 N 0.703
mgf013935m Mimulus guttatus mgf013935m N 0.703
Glyma17g04270.1 Glycine max Glyma17g04270.1 N 0.703
cassava42992.valid.m1 Manihot esculenta cassava42992.valid.m1 N 0.703
cassava18203.valid.m1 Manihot esculenta cassava18203.valid.m1 N 0.703
XM_002866364.1 Arabidopsis lyrata fgenesh2_kg.8__2071__AT5G61020.1 N 0.703
GSVIVG00017649001 Vitis vinifera GSVIVG00017649001 N 0.703
BRADI1G05970 Brachypodium distachyon BRADI1G05970 N 0.703
ppa018635m Prunus persica ppa018635m N 0.703
PDK_20s1308332g001 Phoenix dactylifera PDK_20s1308332g001 N 0.703
PDK_20s1352821g002 Phoenix dactylifera PDK_20s1352821g002 N 0.703
cassava12386.valid.m1 Manihot esculenta cassava12386.valid.m1 N 0.703
cassava12387.valid.m1 Manihot esculenta cassava12387.valid.m1 N 0.703
cassava18205.valid.m1 Manihot esculenta cassava18205.valid.m1 N 0.703
cassava20494.m1 Manihot esculenta cassava20494.m1 N 0.703
cassava18204.valid.m1 Manihot esculenta cassava18204.valid.m1 N 0.703
cassava12389.valid.m1 Manihot esculenta cassava12389.valid.m1 N 0.703
cassava12388.valid.m1 Manihot esculenta cassava12388.valid.m1 N 0.703
cassava20495.m1 Manihot esculenta cassava20495.m1 N 0.703