BRADI2G12380 (Brachypodium distachyon)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 BRADI2G12380 T61953_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G12380.1 YTH 380 470

Links

Other YTH family RBPs
Other Brachypodium distachyon RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g22630 Oryza sativa LOC_Os01g22630 N 0.945
GRMZM2G056573 Zea mays GRMZM2G056573 N 0.879
GRMZM2G098174 Zea mays GRMZM2G098174 N 0.846
SB07G000670 Sorghum bicolor Sb07g000670 N 0.846
BGIOSIBCE010884 Oryza indica BGIOSIBCE010884 N 0.769
LOC_Os03g20180 Oryza sativa LOC_Os03g20180 N 0.769
BRADI1G64100 Brachypodium distachyon BRADI1G64100 N 0.769
XM_002894050.1 Arabidopsis lyrata fgenesh2_kg.1__3903__AT1G48110.2 N 0.758
Medtr8g134440 Medicago truncatula Medtr8g134440 N 0.758
Glyma17g04270.1 Glycine max Glyma17g04270.1 N 0.758
PDK_20s1352821g002 Phoenix dactylifera PDK_20s1352821g002 N 0.758
cassava42992.valid.m1 Manihot esculenta cassava42992.valid.m1 N 0.758
ECT7 Arabidopsis thaliana AT1G48110-TAIR-G N 0.758
GSVIVG00017649001 Vitis vinifera GSVIVG00017649001 N 0.758
cassava42993.valid.m1 Manihot esculenta cassava42993.valid.m1 N 0.758
ppa018635m Prunus persica ppa018635m N 0.758
chr6.LjT36O06.80.nd Lotus japonicus chr6.LjT36O06.80.nd N 0.747
Medtr2g036990 Medicago truncatula Medtr2g036990 N 0.747
MDP0000306387 Malus x domestica MDP0000306387 N 0.736
MDP0000132385 Malus x domestica MDP0000132385 N 0.736
PK02315.1 Cannabis sativa PK02315.1 N 0.736
mgf015583m Mimulus guttatus mgf015583m N 0.736
Glyma07g36110.1 Glycine max Glyma07g36110.1 N 0.736
mgf017987m Mimulus guttatus mgf017987m N 0.736
Glyma09g03590.1 Glycine max Glyma09g03590.1 N 0.736
Cucsa.135220 Cucumis sativus Cucsa.135220 N 0.736
mgf014143m Mimulus guttatus mgf014143m N 0.736
B9HII9_POPTR Populus trichocarpa POPTR_0008s09960 N 0.725
PK05579.1 Cannabis sativa PK05579.1 N 0.725
Glyma15g14490.1 Glycine max Glyma15g14490.1 N 0.725
29889.m003364 Ricinus communis 29889.m003364 N 0.725
Cucsa.356240 Cucumis sativus Cucsa.356240 N 0.714
B9HX84_POPTR Populus trichocarpa POPTR_0010s16210 N 0.714
PK23104.1 Cannabis sativa PK23104.1 N 0.714
ECT6 Arabidopsis thaliana AT3G17330-TAIR-G N 0.703
LOC_Os04g51940 Oryza sativa LOC_Os04g51940 N 0.703
ppa003664m Prunus persica ppa003664m N 0.703
PDK_20s1906441g001 Phoenix dactylifera PDK_20s1906441g001 N 0.703
SB09G004590 Sorghum bicolor Sb09g004590 N 0.703