LjSGA_034621.1 (Lotus japonicus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 LjSGA_034621.1 T62522_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_034621.1 YTH 1 87

Links

Other YTH family RBPs
Other Lotus japonicus RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LjSGA_073042.1 Lotus japonicus LjSGA_073042.1 N 0.924
LjSGA_044186.1 Lotus japonicus LjSGA_044186.1 N 0.891
chr6.CM0885.320.nc Lotus japonicus chr6.CM0885.320.nc N 0.891
chr6.CM0885.260.nc Lotus japonicus chr6.CM0885.260.nc N 0.891
Medtr2g005610 Medicago truncatula Medtr2g005610 N 0.793
Glyma16g00490.1 Glycine max Glyma16g00490.1 N 0.793
SB09G000580 Sorghum bicolor Sb09g000580 N 0.707
MDP0000256033 Malus x domestica MDP0000256033 N 0.707