MBNL3 (Macropus eugenii)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSMEUG00000001183 T02806_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.913
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.913
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMEUP00000001081 CCCH ZF 17 41
ENSMEUP00000001081 CCCH ZF 58 73
ENSMEUP00000001081 CCCH ZF 178 204
ENSMEUP00000001081 CCCH ZF 215 238

Links

Other CCCH ZF family RBPs
Other Macropus eugenii RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_00116 Arthroderma benhamiae ARB_00116 N 0.000
BC1G_00189 Botrytis cinerea BC1G_00189 N 0.000
BDBG_02229 Blastomyces dermatitidis BDBG_02229 N 0.000
ACLA_052020 Aspergillus clavatus CADACLAG00005073 N 0.000
AFLA_051800 Aspergillus flavus CADAFLAG00011171 N 0.000
AFUA_4G13020 Aspergillus fumigatus CADAFUAG00007954 N 0.000
An01g08600 Aspergillus niger CADANGAG00000860 N 0.000
ANIA_03578 Aspergillus nidulans CADANIAG00005166 N 0.000
AO090009000286 Aspergillus oryzae CADAORAG00003756 N 0.000
ATEG_03185 Aspergillus terreus CADATEAG00008323 N 0.000
NFIA_103330 Neosartorya fischeri CADNFIAG00010242 N 0.000
CIMG_00632 Coccidioides immitis CIMG_00632 N 0.000
CPSG_09242 Coccidioides posadasii CPSG_09242 N 0.000
estExt_Genewise1.C_290124 Neurospora tetrasperma estExt_Genewise1.C_290124 N 0.000
estExt_Genewise1Plus.C_13473 Trichoderma atroviride estExt_Genewise1Plus.C_13473 N 0.000
estExt_Genewise1Plus.C_40825 Neurospora discreta estExt_Genewise1Plus.C_40825 N 0.000
e_gw1.5.87.1 Trichoderma reesei e_gw1.5.87.1 N 0.000
e_gw1.6.94.1 Cryphonectria parasitica e_gw1.6.94.1 N 0.000
fgenesh1_pg.C_scaffold_7000377 Trichoderma virens fgenesh1_pg.C_scaffold_7000377 N 0.000
fgenesh1_pm.00009_#_468 Aspergillus carbonarius fgenesh1_pm.00009_#_468 N 0.000
fgenesh1_pm.sca_3_chr4_2_0000335 Nectria haematococca fgenesh1_pm.sca_3_chr4_2_0000335 N 0.000
fgenesh2_pm.1_#_1003 Thielavia terrestris fgenesh2_pm.1_#_1003 N 0.000
FGSG_12995 Fusarium graminearum FGSG_12995 N 0.000
FOXG_01987 Fusarium oxysporum FOXG_01987 N 0.000
FVEG_05147 Fusarium verticillioides FVEG_05147 N 0.000
GLRG_01552 Colletotrichum graminicola GLRG_01552 N 0.000
HCAG_07022 Histoplasma capsulatum HCAG_07022 N 0.000
MCYG_01086 Microsporum canis MCYG_01086 N 0.000
MGG_04405 Magnaporthe oryzae MGG_04405 N 0.000
MGYG_01632 Microsporum gypseum MGYG_01632 N 0.000
NCU07418 Neurospora crassa NCU07418 N 0.000
PABG_03020 Paracoccidioides brasiliensis PABG_03020 N 0.000
Pa_1_10420 Podospora anserina Pa_1_10420 N 0.000
Pc22g02970 Penicillium chrysogenum Pc22g02970 N 0.000
PMAA_081480 Penicillium marneffei PMAA_081480 N 0.000
SS1G_04219 Sclerotinia sclerotiorum SS1G_04219 N 0.000
TERG_07499 Trichophyton rubrum TERG_07499 N 0.000
TRV_06656 Trichophyton verrucosum TRV_06656 N 0.000
UREG_00636 Uncinocarpus reesii UREG_00636 N 0.000
VDAG_04286 Verticillium dahliae VDAG_04286 N 0.000