CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Unkl
(
Mus musculus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSMUSG00000015127
T02982_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000039670
CCCH ZF
81
103
CSKYDEATGLCPDGDECPYLHRT
ENSMUSP00000039670
CCCH ZF
286
312
YKSTKCNDMRQTGYCPRGPFCAFAHTE
ENSMUSP00000124121
CCCH ZF
55
78
YCSKYDEATGLCPDGDECPYLHRT
ENSMUSP00000124121
CCCH ZF
89
100
RYYKTGTCIHET
ENSMUSP00000124121
CCCH ZF
102
119
ARGHCVKNGLHCAFAHGP
ENSMUSP00000124276
CCCH ZF
100
126
YKSTKCNDMRQTGYCPRGPFCAFAHTE
Links
Other
CCCH ZF
family RBPs
Other
Mus musculus
RBPs
69 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF1
Echinops telfairi
ENSETEG00000004507
N
0.000
CELF2
Meleagris gallopavo
ENSMGAG00000004551
N
0.000
CELF2
Sus scrofa
ENSSSCG00000011121
N
0.000
CELF1
Sus scrofa
ENSSSCG00000013233
N
0.000