MBNL3 (Oryctolagus cuniculus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSOCUG00000014979 T03060_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.891
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.891
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000012871 CCCH ZF 17 41
ENSOCUP00000012871 CCCH ZF 58 73
ENSOCUP00000012871 CCCH ZF 175 201
ENSOCUP00000012871 CCCH ZF 212 235
ENSOCUP00000015512 CCCH ZF 17 41
ENSOCUP00000015512 CCCH ZF 58 73
ENSOCUP00000015512 CCCH ZF 175 201
ENSOCUP00000015512 CCCH ZF 212 235
ENSOCUP00000021275 CCCH ZF 17 41
ENSOCUP00000021275 CCCH ZF 58 73
ENSOCUP00000021275 CCCH ZF 175 201
ENSOCUP00000021275 CCCH ZF 212 235

Links

Other CCCH ZF family RBPs
Other Oryctolagus cuniculus RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH54991 Xenopus laevis AAH54991 N 0.000
Ame_R015252 Ailuropoda melanoleuca Ame_R015252 N 0.000
ENSACAG00000000494 Anolis carolinensis ENSACAG00000000494 N 0.000
RBM7 Anolis carolinensis ENSACAG00000011589 N 0.000
RBM7_BOVIN Bos taurus ENSBTAG00000008219 N 0.000
RBM7 Canis familiaris ENSCAFG00000013514 N 0.000
RBM7 Choloepus hoffmanni ENSCHOG00000012747 N 0.000
LOC100403943 Callithrix jacchus ENSCJAG00000011949 N 0.000
RBM7 Cavia porcellus ENSCPOG00000005320 N 0.000
RBM11 Danio rerio ENSDARG00000020841 N 0.000
RBM7 Dasypus novemcinctus ENSDNOG00000018423 N 0.000
LOC100062305 Equus caballus ENSECAG00000004636 N 0.000
RBM7 Erinaceus europaeus ENSEEUG00000015854 N 0.000
RBM7 Echinops telfairi ENSETEG00000015869 N 0.000
RBM7 Felis catus ENSFCAG00000015443 N 0.000
RBM7 Homo sapiens ENSG00000076053 N 0.000
Q5ZLE3_CHICK Gallus gallus ENSGALG00000007017 N 0.000
RBM7 Gorilla gorilla ENSGGOG00000009941 N 0.000
RBM7 Loxodonta africana ENSLAFG00000012444 N 0.000
RBM7 Macropus eugenii ENSMEUG00000006187 N 0.000
RBM7 Meleagris gallopavo ENSMGAG00000003004 N 0.000
RBM7 Microcebus murinus ENSMICG00000010087 N 0.000
RBM7 Macaca mulatta ENSMMUG00000012270 N 0.000
RBM7 Monodelphis domestica ENSMODG00000013918 N 0.000
Rbm7 Mus musculus ENSMUSG00000042396 N 0.000
RBM7 Ornithorhynchus anatinus ENSOANG00000001755 N 0.000
RBM7 Oryctolagus cuniculus ENSOCUG00000003342 N 0.000
RBM7 Ochotona princeps ENSOPRG00000011060 N 0.000
RBM7 Procavia capensis ENSPCAG00000003270 N 0.000
ENSPPYG00000003894 Pongo pygmaeus ENSPPYG00000003894 N 0.000
RBM7 Pan troglodytes ENSPTRG00000004305 N 0.000
RBM7 Pteropus vampyrus ENSPVAG00000005294 N 0.000
Rbm7 Rattus norvegicus ENSRNOG00000005710 N 0.000
RBM7 Sus scrofa ENSSSCG00000015057 N 0.000
RBM7 Spermophilus tridecemlineatus ENSSTOG00000012459 N 0.000
RBM7 Tupaia belangeri ENSTBEG00000008650 N 0.000
RBM7 Taeniopygia guttata ENSTGUG00000000117 N 0.000
RBM7 Tarsius syrichta ENSTSYG00000013731 N 0.000
RBM7 Tursiops truncatus ENSTTRG00000001515 N 0.000
rbm7 Xenopus tropicalis ENSXETG00000012654 N 0.000