Glyma03g38550.1 (Glycine max)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Glyma03g38550.1 T14483_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma03g38550.1 CCHC ZF 746 763

Links

Other CCHC ZF family RBPs
Other Glycine max RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
62054 Helobdella robusta 62054 I 0.000
63157 Helobdella robusta 63157 N 0.000
90208 Helobdella robusta 90208 I 0.000
AAA81375 Xenopus laevis AAA81375 I 0.000
AAEL014033 Aedes aegypti AAEL014033 I 0.000
AAH46942 Xenopus laevis AAH46942 I 0.000
AAH57704 Xenopus laevis AAH57704 I 0.000
AAH72134 Xenopus laevis AAH72134 I 0.000
ACH69784 Xenopus laevis ACH69784 I 0.000
ACH69785 Xenopus laevis ACH69785 I 0.000
ACH69786 Xenopus laevis ACH69786 N 0.000
AGAP004950 Anopheles gambiae AGAP004950 I 0.000
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.000
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.000
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.000
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.000
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.000
Bm1_27610 Brugia malayi Bm1_27610 I 0.000
unc-75 Caenorhabditis elegans C17D12.2 D 0.000
CBG15358 Caenorhabditis briggsae CBG15358 I 0.000
CJA07020 Caenorhabditis japonica CJA07020 I 0.000
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.000
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.000
CRE09771 Caenorhabditis remanei CRE09771 I 0.000
ENSACAG00000010826 Anolis carolinensis ENSACAG00000010826 N 0.000
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.000
CELF6 Bos taurus ENSBTAG00000014092 I 0.000
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.000
CELF3 Canis familiaris ENSCAFG00000012794 I 0.000
CELF6 Canis familiaris ENSCAFG00000017695 N 0.000
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.000
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.000
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.000
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.000
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.000
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.000
CELF6 Cavia porcellus ENSCPOG00000025842 I 0.000
CELF3 Danio rerio ENSDARG00000006983 I 0.000
celf3 Danio rerio ENSDARG00000034668 I 0.000
celf5 Danio rerio ENSDARG00000071375 I 0.000
zgc:165603 Danio rerio ENSDARG00000078665 N 0.000
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.000
Celf4 Dipodomys ordii ENSDORG00000007169 N 0.000
CELF3 Equus caballus ENSECAG00000020365 I 0.000
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.000
CELF6 Felis catus ENSFCAG00000016249 I 0.000
BRUNOL4 Homo sapiens ENSG00000101489 D 0.000
BRUNOL6 Homo sapiens ENSG00000140488 D 0.000
CELF3 Homo sapiens ENSG00000159409 I 0.000
BRUNOL5 Homo sapiens ENSG00000161082 D 0.000
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.000
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.000
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.000
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.000
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.000
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.000
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.000
ENSGALG00000018499 Gallus gallus ENSGALG00000018499 N 0.000
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.000
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.000
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.000
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.000
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.000
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.000
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.000
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.000
CELF6 Macropus eugenii ENSMEUG00000010988 I 0.000
CELF5 Macropus eugenii ENSMEUG00000013080 I 0.000
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.000
HEXA Macaca mulatta ENSMMUG00000010687 I 0.000
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.000
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.000
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.000
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.000
Celf4 Mus musculus ENSMUSG00000024268 I 0.000
Celf3 Mus musculus ENSMUSG00000028137 I 0.000
Celf6 Mus musculus ENSMUSG00000032297 I 0.000
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.000
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.000
CELF6 Oryctolagus cuniculus ENSOCUG00000021663 I 0.000
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.000
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.000
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.000
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.000
CELF5 Oryzias latipes ENSORLG00000004600 I 0.000
CELF4 Oryzias latipes ENSORLG00000008913 I 0.000
CELF3 Oryzias latipes ENSORLG00000010447 I 0.000
CELF6 Oryzias latipes ENSORLG00000013392 I 0.000
CELF4 Procavia capensis ENSPCAG00000000126 N 0.000
CELF3 Procavia capensis ENSPCAG00000001623 I 0.000
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.000
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.000
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.000
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.000
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.000
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.000
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.000
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.000
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.000
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.000
CELF6 Sus scrofa ENSSSCG00000001928 I 0.000
CELF3 Sus scrofa ENSSSCG00000006618 I 0.000
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.000
TNRC4 Taeniopygia guttata ENSTGUG00000001647 N 0.000
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.000
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.000
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.000
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.000
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.000
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.000
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.000
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.000
CELF6 Tursiops truncatus ENSTTRG00000002503 I 0.000
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.000
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.000
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.000
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.000
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.000
GF10965 Drosophila ananassae FBgn0088005 I 0.000
GG13757 Drosophila erecta FBgn0106020 I 0.000
GH14684 Drosophila grimshawi FBgn0122160 I 0.000
GI13095 Drosophila mojavensis FBgn0135852 I 0.000
GL21647 Drosophila persimilis FBgn0159240 I 0.000
GM24582 Drosophila sechellia FBgn0179445 I 0.000
GD12651 Drosophila simulans FBgn0184378 I 0.000
GJ13842 Drosophila virilis FBgn0201061 I 0.000
GK17101 Drosophila willistoni FBgn0219100 I 0.000
GE20053 Drosophila yakuba FBgn0237378 I 0.000
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.000
bru-3 Drosophila melanogaster FBgn0262350 D 0.000
fgenesh2_pg.C_sca_131000025 Lottia gigantea fgenesh2_pg.C_sca_131000025 N 0.000
LOAG_05508 Loa loa LOAG_05508 I 0.000
LOAG_12531 Loa loa LOAG_12531 N 0.000
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.000
PHUM315130 Pediculus humanus PHUM315130 I 0.000
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.000
Q91579 Xenopus laevis Q91579 I 0.000
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.000
Smp_041280 Schistosoma mansoni Smp_041280 I 0.000
Smp_131780 Schistosoma mansoni Smp_131780 I 0.000
XP_001192920.1 Strongylocentrotus purpuratus XP_001192920.1 I 0.000
XP_781047.2 Strongylocentrotus purpuratus XP_781047.2 I 0.000