CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SPOG_01415
(
Schizosaccharomyces cryophilus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
SPOG_01415
T30739_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPOG_01415T0
RRM
227
297
LFVCKLNPVTQDEDLELIFSRFGKINSCQIIRDKETGNSLQYAFIEFDNKESVEKAYFKMQNVLIDDARIH
Links
Other
RRM
family RBPs
Other
Schizosaccharomyces cryophilus
RBPs
168 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBN03982
Caenorhabditis brenneri
CBN03982
N
0.000
CJA12261
Caenorhabditis japonica
CJA12261
N
0.000
CRE13706
Caenorhabditis remanei
CRE13706
N
0.000
K08D12.3
Caenorhabditis elegans
K08D12.3
N
0.000