ENSCJAG00000013619 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000013619 T35599_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.901
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.718
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000025049 RRM 10 78

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH70649 Xenopus laevis AAH70649 I 0.845
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.901
Ame_R020019 Ailuropoda melanoleuca Ame_R020019 I 0.826
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.901
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.789
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.901
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.789
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.889
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.901
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.789
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.831
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.901
RBMX Cavia porcellus ENSCPOG00000012164 I 0.901
rbmx Danio rerio ENSDARG00000014244 I 0.761
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.803
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.901
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.789
LOC100054583 Equus caballus ENSECAG00000021380 I 0.901
RBMX Felis catus ENSFCAG00000004779 I 0.775
RBMX Homo sapiens ENSG00000147274 D 1.000
RBMXL2 Homo sapiens ENSG00000170748 I 0.845
RBMXL3 Homo sapiens ENSG00000175718 I 0.746
RBMXL1 Homo sapiens ENSG00000213516 I 0.873
RBMY1A1 Homo sapiens ENSG00000234414 D 0.704
RBMY1E Homo sapiens ENSG00000242389 I 0.704
RBMY1B Homo sapiens ENSG00000242875 I 0.704
RBMY1D Homo sapiens ENSG00000244395 I 0.704
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.817
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.901
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.873
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.732
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.901
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.901
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.789
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.789
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.859
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.873
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.873
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.901
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.901
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.901
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.873
Rbmx Mus musculus ENSMUSG00000031134 I 0.901
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.887
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.887
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.775
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.901
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.901
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.817
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.901
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.901
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.817
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.873
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.845
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.901
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.873
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.845
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.873
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.704
Q52NW1_PANTR Pan troglodytes ENSPTRG00000028822 I 0.704
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 0.704
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 0.704
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 0.704
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 0.704
RBMX Pan troglodytes ENSPTRG00000034071 I 0.859
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.901
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.873
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.746
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.873
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.901
ENSTBEG00000001154 Tupaia belangeri ENSTBEG00000001154 I 0.913
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.901
RBMXL3 Tetraodon nigroviridis ENSTNIG00000016844 I 0.789
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.803
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.887
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.775
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.901
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.913
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.901