Q52NW1_PANTR (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000028822 T40804_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.986
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.986
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.817
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000048413 RRM 10 79

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 1.000
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 1.000
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 1.000
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 1.000
RBMY1A1 Homo sapiens ENSG00000234414 D 0.986
RBMY1E Homo sapiens ENSG00000242389 I 0.986
RBMY1D Homo sapiens ENSG00000244395 I 0.986
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.986
RBMY1B Homo sapiens ENSG00000242875 I 0.986
RBMY1J Homo sapiens ENSG00000226941 I 0.971
RBMY1F Homo sapiens ENSG00000169800 I 0.971
ENSPTRG00000028821 Pan troglodytes ENSPTRG00000028821 I 0.957
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.817
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.803
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.803
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.803
RBMXL1 Homo sapiens ENSG00000213516 I 0.803
RBMX Homo sapiens ENSG00000147274 D 0.803
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.803
Rbmx Mus musculus ENSMUSG00000031134 I 0.803
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.803
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.803
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.803
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.803
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.803
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.803
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.803
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.803
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.803
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.803
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.803
LOC100054583 Equus caballus ENSECAG00000021380 I 0.803
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.803
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.803
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.803
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.803
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.803
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.803
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.803
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.803
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.803
RBMX Cavia porcellus ENSCPOG00000012164 I 0.803
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.803
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.792
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.789
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.789
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.789
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.789
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.789
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.789
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.789
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.789
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.789
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.775
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.775
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.775
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.775
RBMXL2 Homo sapiens ENSG00000170748 I 0.775
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.775
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.775
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.761
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.761
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.761
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.761
RBMX Pan troglodytes ENSPTRG00000034071 I 0.746
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.746
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.746
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.746
RBMXL3 Homo sapiens ENSG00000175718 I 0.718
AAH70649 Xenopus laevis AAH70649 I 0.718
rbmx Danio rerio ENSDARG00000014244 I 0.718
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.704
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.704
RBMX Felis catus ENSFCAG00000004779 I 0.704
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.704
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.704
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.704
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.704