RBM39 (Monodelphis domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMODG00000001557 T39041_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000001901 RRM 155 223
ENSMODP00000001901 RRM 252 322
ENSMODP00000001901 RRM 446 505

Links

Other RRM family RBPs
Other Monodelphis domestica RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL005046 Aedes aegypti AAEL005046 N 0.781
AAH75146 Xenopus laevis AAH75146 N 0.945
AAH77813 Xenopus laevis AAH77813 N 0.950
AGAP008433 Anopheles gambiae AGAP008433 N 0.741
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.761
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.990
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.766
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.766
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.766
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.766
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.741
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.980
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.990
RBM39 Canis familiaris ENSCAFG00000008327 N 0.990
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.990
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.915
ENSCPOG00000021775 Cavia porcellus ENSCPOG00000021775 N 0.880
rbm39a Danio rerio ENSDARG00000011613 N 0.895
rbm39b Danio rerio ENSDARG00000041853 N 0.890
RBM39 Dasypus novemcinctus ENSDNOG00000025219 N 0.755
RBM39 Equus caballus ENSECAG00000013423 N 0.990
RBM39 Echinops telfairi ENSETEG00000016295 N 0.880
RBM39 Homo sapiens ENSG00000131051 N 0.990
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.869
RBM23 Gasterosteus aculeatus ENSGACG00000003376 N 0.870
RBM39 Gallus gallus ENSGALG00000001550 N 0.985
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.965
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.990
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.980
RBM39 Microcebus murinus ENSMICG00000001668 N 0.990
Rbm39 Mus musculus ENSMUSG00000027620 N 0.990
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.990
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.915
RBM23 Oryzias latipes ENSORLG00000009919 N 0.900
RBM23 Oryzias latipes ENSORLG00000010370 N 0.880
RBM39 Procavia capensis ENSPCAG00000008764 N 0.880
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.990
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.990
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.990
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.990
RBM39 Sorex araneus ENSSARG00000007673 N 0.990
RBM39 Sus scrofa ENSSSCG00000007309 N 0.990
RBM39 Tupaia belangeri ENSTBEG00000017320 N 0.855
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.985
RBM23 Tetraodon nigroviridis ENSTNIG00000005223 N 0.795
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.885
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.880
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.990
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.990
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.955
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.760
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.756
e_gw.57.85.1 Branchiostoma floridae e_gw.57.85.1 N 0.705
CG11266 Drosophila melanogaster FBgn0031883 N 0.726
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.721
GF14957 Drosophila ananassae FBgn0091982 N 0.726
GG10454 Drosophila erecta FBgn0102763 N 0.726
GH13506 Drosophila grimshawi FBgn0120982 N 0.736
GI10246 Drosophila mojavensis FBgn0133011 N 0.726
GM16278 Drosophila sechellia FBgn0171194 N 0.726
GD23448 Drosophila simulans FBgn0194830 N 0.726
GJ18017 Drosophila virilis FBgn0205182 N 0.726
GK15272 Drosophila willistoni FBgn0217277 N 0.736
GE14328 Drosophila yakuba FBgn0231943 N 0.731
PHUM394230 Pediculus humanus PHUM394230 N 0.766