Glyma05g32080.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma05g32080.1 T52667_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma05g32080.1 RRM 197 266
Glyma05g32080.1 RRM 299 369
Glyma05g32080.1 RRM 482 536

Links

Other RRM family RBPs
Other Glycine max RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30183.m001297 Ricinus communis 30183.m001297 N 0.741
AC233901.1_FG001 Zea mays AC233901.1_FG001 N 0.777
XM_002873382.1 Arabidopsis lyrata Al_scaffold_0006_891 N 0.838
AT2G16940 Arabidopsis thaliana AT2G16940-TAIR-G N 0.719
AT5G09880 Arabidopsis thaliana AT5G09880-TAIR-G N 0.828
BRADI1G74820 Brachypodium distachyon BRADI1G74820 N 0.772
BRADI3G27480 Brachypodium distachyon BRADI3G27480 N 0.746
cassava37705.valid.m1 Manihot esculenta cassava37705.valid.m1 N 0.741
Cucsa.101320 Cucumis sativus Cucsa.101320 N 0.898
Cucsa.370400 Cucumis sativus Cucsa.370400 N 0.736
XM_002886041.1 Arabidopsis lyrata fgenesh2_kg.3__3274__AT2G16940.1 N 0.721
Glyma06g15370.1 Glycine max Glyma06g15370.1 N 0.924
Glyma08g15370.1 Glycine max Glyma08g15370.1 N 0.954
Glyma10g42890.1 Glycine max Glyma10g42890.1 N 0.766
Glyma20g24130.1 Glycine max Glyma20g24130.1 N 0.756
GRMZM2G071589 Zea mays GRMZM2G071589 N 0.756
GRMZM2G076597 Zea mays GRMZM2G076597 N 0.751
GSVIVG00022281001 Vitis vinifera GSVIVG00022281001 N 0.853
GSVIVG00023998001 Vitis vinifera GSVIVG00023998001 N 0.777
LOC_Os03g05830 Oryza sativa LOC_Os03g05830 N 0.782
MDP0000159547 Malus x domestica MDP0000159547 N 0.777
MDP0000319817 Malus x domestica MDP0000319817 N 0.726
Medtr4g141620 Medicago truncatula Medtr4g141620 N 0.909
mgf012385m Mimulus guttatus mgf012385m N 0.721
PDK_20s1322741g003 Phoenix dactylifera PDK_20s1322741g003 N 0.701
PDK_20s1549391g001 Phoenix dactylifera PDK_20s1549391g001 N 0.797
PK01525.1 Cannabis sativa PK01525.1 N 0.726
PK20903.1 Cannabis sativa PK20903.1 N 0.878
B9H6Q0_POPTR Populus trichocarpa POPTR_0005s19200 N 0.848
ppa002854m Prunus persica ppa002854m N 0.904
ppa003064m Prunus persica ppa003064m N 0.726
SB01G021020 Sorghum bicolor Sb01g021020 N 0.756
SB01G046740 Sorghum bicolor Sb01g046740 N 0.777