Glyma14g04480.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma14g04480.1 T52842_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma14g04480.1 RRM 172 241
Glyma14g04480.1 RRM 268 337

Links

Other RRM family RBPs
Other Glycine max RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30006.m000276 Ricinus communis 30006.m000276 N 0.736
30099.m001684 Ricinus communis 30099.m001684 N 0.764
AT2G41060 Arabidopsis thaliana AT2G41060-TAIR-G N 0.743
UBA2A Arabidopsis thaliana AT3G56860-TAIR-G N 0.721
BGIOSIBCE001249 Oryza indica BGIOSIBCE001249 N 0.721
BRADI2G09820 Brachypodium distachyon BRADI2G09820 N 0.700
cassava22353.valid.m1 Manihot esculenta cassava22353.valid.m1 N 0.829
cassava22354.valid.m1 Manihot esculenta cassava22354.valid.m1 N 0.829
cassava22355.valid.m1 Manihot esculenta cassava22355.valid.m1 N 0.829
cassava22357.valid.m1 Manihot esculenta cassava22357.valid.m1 N 0.807
cassava22358.valid.m1 Manihot esculenta cassava22358.valid.m1 N 0.807
cassava8977.m1 Manihot esculenta cassava8977.m1 N 0.729
chr2.CM0031.350.nc Lotus japonicus chr2.CM0031.350.nc N 0.871
Cucsa.250370 Cucumis sativus Cucsa.250370 N 0.779
XM_002878068.1 Arabidopsis lyrata fgenesh2_kg.5__2117__AT3G56860.3 N 0.721
Glyma02g44330.1 Glycine max Glyma02g44330.1 N 0.971
Glyma03g27290.1 Glycine max Glyma03g27290.1 N 0.736
Glyma19g30250.1 Glycine max Glyma19g30250.1 N 0.750
GRMZM2G132465 Zea mays GRMZM2G132465 N 0.743
GSVIVG00037491001 Vitis vinifera GSVIVG00037491001 N 0.821
LOC_Os01g16090 Oryza sativa LOC_Os01g16090 N 0.721
MDP0000218409 Malus x domestica MDP0000218409 N 0.757
MDP0000381936 Malus x domestica MDP0000381936 N 0.764
MDP0000792725 Malus x domestica MDP0000792725 N 0.764
MDP0000905699 Malus x domestica MDP0000905699 N 0.757
Medtr5g095270 Medicago truncatula Medtr5g095270 N 0.857
Medtr7g104960 Medicago truncatula Medtr7g104960 N 0.729
mgf002509m Mimulus guttatus mgf002509m N 0.729
mgf005672m Mimulus guttatus mgf005672m N 0.729
mgf012484m Mimulus guttatus mgf012484m N 0.729
mgf019210m Mimulus guttatus mgf019210m N 0.729
PK11606.1 Cannabis sativa PK11606.1 N 0.807
PK27017.1 Cannabis sativa PK27017.1 N 0.750
B9HDH2_POPTR Populus trichocarpa POPTR_0006s02650 N 0.736
B9IHG4_POPTR Populus trichocarpa POPTR_0016s02440 N 0.736
ppa004648m Prunus persica ppa004648m N 0.757
SB03G010380 Sorghum bicolor Sb03g010380 N 0.707
XM_002879859.1 Arabidopsis lyrata scaffold_402914.1 N 0.729