Medtr5g095270 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr5g095270 T54564_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr5g095270.1 RRM 167 236
Medtr5g095270.1 RRM 263 332

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
chr2.CM0031.350.nc Lotus japonicus chr2.CM0031.350.nc N 0.879
Glyma02g44330.1 Glycine max Glyma02g44330.1 N 0.879
Glyma14g04480.1 Glycine max Glyma14g04480.1 N 0.857
GSVIVG00037491001 Vitis vinifera GSVIVG00037491001 N 0.800
PK11606.1 Cannabis sativa PK11606.1 N 0.800
cassava22353.valid.m1 Manihot esculenta cassava22353.valid.m1 N 0.793
cassava22354.valid.m1 Manihot esculenta cassava22354.valid.m1 N 0.793
cassava22355.valid.m1 Manihot esculenta cassava22355.valid.m1 N 0.793
cassava22358.valid.m1 Manihot esculenta cassava22358.valid.m1 N 0.771
cassava22357.valid.m1 Manihot esculenta cassava22357.valid.m1 N 0.771
Cucsa.250370 Cucumis sativus Cucsa.250370 N 0.750
LOC_Os01g16090 Oryza sativa LOC_Os01g16090 N 0.736
BGIOSIBCE001249 Oryza indica BGIOSIBCE001249 N 0.736
MDP0000792725 Malus x domestica MDP0000792725 N 0.736
MDP0000381936 Malus x domestica MDP0000381936 N 0.736
mgf005672m Mimulus guttatus mgf005672m N 0.729
mgf002509m Mimulus guttatus mgf002509m N 0.729
Glyma19g30250.1 Glycine max Glyma19g30250.1 N 0.729
mgf012484m Mimulus guttatus mgf012484m N 0.729
cassava8977.m1 Manihot esculenta cassava8977.m1 N 0.729
XM_002879859.1 Arabidopsis lyrata scaffold_402914.1 N 0.729
MDP0000905699 Malus x domestica MDP0000905699 N 0.729
30099.m001684 Ricinus communis 30099.m001684 N 0.729
AT2G41060 Arabidopsis thaliana AT2G41060-TAIR-G N 0.729
B9HDH2_POPTR Populus trichocarpa POPTR_0006s02650 N 0.729
MDP0000218409 Malus x domestica MDP0000218409 N 0.729
Glyma03g27290.1 Glycine max Glyma03g27290.1 N 0.721
ppa004648m Prunus persica ppa004648m N 0.721
GRMZM2G132465 Zea mays GRMZM2G132465 N 0.721
PK27017.1 Cannabis sativa PK27017.1 N 0.714
B9IHG4_POPTR Populus trichocarpa POPTR_0016s02440 N 0.714
30006.m000276 Ricinus communis 30006.m000276 N 0.707
BRADI2G09820 Brachypodium distachyon BRADI2G09820 N 0.700
Medtr7g104960 Medicago truncatula Medtr7g104960 N 0.700
cassava6906.valid.m1 Manihot esculenta cassava6906.valid.m1 N 0.700
XM_002878068.1 Arabidopsis lyrata fgenesh2_kg.5__2117__AT3G56860.3 N 0.700
UBA2A Arabidopsis thaliana AT3G56860-TAIR-G N 0.700