Glyma17g01800.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma17g01800.1 T52888_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
gw1.219.6.1_CONSTRUCT
M199_0.6 		RNAcompete CONSTRUCTS UGUUUUD RNAcompete
Ray et al.(2013)
RNCMPT00229 		0.739
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma17g01800.1 RRM 67 134
Glyma17g01800.1 RRM 160 231
Glyma17g01800.1 RRM 267 331

Links

Other RRM family RBPs
Other Glycine max RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_03224 Botrytis cinerea BC1G_03224 N 0.000
CHGG_04655 Chaetomium globosum CHGG_04655 N 0.000
e_gw1.2.858.1 Trichoderma reesei e_gw1.2.858.1 N 0.000
e_gw1.3.1867.1 Neurospora discreta e_gw1.3.1867.1 N 0.000
fgenesh1_pg.C_scaffold_2000270 Trichoderma atroviride fgenesh1_pg.C_scaffold_2000270 N 0.000
fgenesh1_pm.1_#_413 Myceliophthora thermophila fgenesh1_pm.1_#_413 N 0.000
fgenesh1_pm.C_scaffold_4000255 Neurospora tetrasperma fgenesh1_pm.C_scaffold_4000255 N 0.000
fgenesh2_pg.1_#_466 Thielavia terrestris fgenesh2_pg.1_#_466 N 0.000
FOXG_08275 Fusarium oxysporum FOXG_08275 N 0.000
GLRG_05733 Colletotrichum graminicola GLRG_05733 N 0.000
gw1.1.1031.1 Trichoderma virens gw1.1.1031.1 N 0.000
NCU09742 Neurospora crassa NCU09742 N 0.000
Pa_6_3170 Podospora anserina Pa_6_3170 N 0.000
VDBG_08298 Verticillium albo atrum VDBG_08298 N 0.000