ZFP36 (Oryctolagus cuniculus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSOCUG00000003400 T03045_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZFP36
M268_0.6 		Homo sapiens Sequence logo not available AUUUA RIP-chip
Cook et al.(2011)
194_18256032.1 		1.000
ZFP36
M267_0.6 		Homo sapiens Sequence logo not available UUAUUUAUU RIP-chip
Cook et al.(2011)
194_18256032 		1.000
ZFP36
M266_0.6 		Homo sapiens Sequence logo not available UUGUGS RIP-chip
Cook et al.(2011)
193_18367721.3 		1.000
ZFP36
M265_0.6 		Homo sapiens Sequence logo not available CUUGU RIP-chip
Cook et al.(2011)
193_18367721.2 		1.000
ZFP36
M264_0.6 		Homo sapiens Sequence logo not available HCYUBY RIP-chip
Cook et al.(2011)
193_18367721.1 		1.000
ZFP36
M263_0.6 		Homo sapiens Sequence logo not available AAUAA RIP-chip
Cook et al.(2011)
193_18367721 		1.000
ZFP36
M350_0.6 		Homo sapiens UUAUUUAWW SELEX
Cook et al.(2011)
951_12324455 		1.000
ZFP36
M269_0.6 		Homo sapiens UUAUUUAWW SELEX
Cook et al.(2011)
221_12324455 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000002948 CCCH ZF 89 115
ENSOCUP00000002948 CCCH ZF 127 153

Links

Other CCCH ZF family RBPs
Other Oryctolagus cuniculus RBPs

128 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ELAVL4 Homo sapiens ENSG00000162374 D 0.000
ELAVL2 Homo sapiens ENSG00000107105 D 0.000
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.000
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.000
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.000
ELAVL3 Sorex araneus ENSSARG00000005949 I 0.000
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.000
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.000
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.000
ELAVL4 Spermophilus tridecemlineatus ENSSTOG00000002834 I 0.000
ELAVL2 Tupaia belangeri ENSTBEG00000017759 I 0.000
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.000
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.000
ELAVL1 Tetraodon nigroviridis ENSTNIG00000004733 I 0.000
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.000
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.000
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.000
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.000
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.000
ELAVL2 Procavia capensis ENSPCAG00000014998 I 0.000
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.000
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.000
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.000
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.000
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.000
ELAVL1 Pteropus vampyrus ENSPVAG00000002299 I 0.000
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.000
ELAVL4 Pteropus vampyrus ENSPVAG00000003632 I 0.000
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.000
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.000
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.000
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.000
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.000
AAA96943 Xenopus laevis AAA96943 I 0.000
AAA96944 Xenopus laevis AAA96944 I 0.000
AAA96945 Xenopus laevis AAA96945 I 0.000
AAH94189 Xenopus laevis AAH94189 I 0.000
AAH99348 Xenopus laevis AAH99348 I 0.000
AAI69769 Xenopus laevis AAI69769 I 0.000
AAI70539 Xenopus laevis AAI70539 I 0.000
CAA59430 Xenopus laevis CAA59430 I 0.000
CBF67567 Xenopus laevis CBF67567 I 0.000
CBU92440 Xenopus laevis CBU92440 I 0.000
Q91584 Xenopus laevis Q91584 I 0.000
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.000
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.000
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.000
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.000
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.000
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.000
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.000
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.000
ELAVL1 Tursiops truncatus ENSTTRG00000010180 I 0.000
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.000
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.000
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.000
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.000
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.000
Q91903 Xenopus laevis Q91903 I 0.000
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.000
elavl4 Danio rerio ENSDARG00000045639 I 0.000
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.000
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.000
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.000
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.000
ELAVL2 Equus caballus ENSECAG00000020142 I 0.000
LOC100051268 Equus caballus ENSECAG00000022284 I 0.000
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.000
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.000
ELAVL3 Homo sapiens ENSG00000196361 I 0.000
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.000
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.000
elavl2 Danio rerio ENSDARG00000040732 I 0.000
elavl3 Danio rerio ENSDARG00000014420 I 0.000
ELAVL3 Anolis carolinensis ENSACAG00000016958 I 0.000
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.000
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.000
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.000
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.000
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.000
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.000
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.000
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.000
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.000
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.000
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.000
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.000
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.000
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.000
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.000
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.000
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.000
Elavl3 Mus musculus ENSMUSG00000003410 I 0.000
Elavl2 Mus musculus ENSMUSG00000008489 I 0.000
Elavl4 Mus musculus ENSMUSG00000028546 I 0.000
ELAVL2 Ornithorhynchus anatinus ENSOANG00000009634 I 0.000
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.000
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.000
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.000
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.000
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.000
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.000
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.000
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.000
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.000
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.000
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.000
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.000
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.000
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.000
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.000
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.000
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.000
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.000
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.000
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.000