ENSPPYG00000005456 (Pongo pygmaeus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSPPYG00000005456 T03198_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.882
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.882
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000006216 CCCH ZF 16 40
ENSPPYP00000006216 CCCH ZF 57 72
ENSPPYP00000006216 CCCH ZF 177 203
ENSPPYP00000006216 CCCH ZF 215 237
ENSPPYP00000006217 CCCH ZF 16 40
ENSPPYP00000006217 CCCH ZF 57 72
ENSPPYP00000006217 CCCH ZF 177 203
ENSPPYP00000006217 CCCH ZF 215 237
ENSPPYP00000006218 CCCH ZF 16 40
ENSPPYP00000006218 CCCH ZF 57 72
ENSPPYP00000006218 CCCH ZF 177 203
ENSPPYP00000006218 CCCH ZF 215 237
ENSPPYP00000006219 CCCH ZF 16 40
ENSPPYP00000006219 CCCH ZF 57 72
ENSPPYP00000006219 CCCH ZF 177 203
ENSPPYP00000006219 CCCH ZF 215 237

Links

Other CCCH ZF family RBPs
Other Pongo pygmaeus RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.000
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.000
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.000
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.000
Ame_R003219 Ailuropoda melanoleuca Ame_R003219 N 0.000
tial1 Xenopus tropicalis ENSXETG00000010234 N 0.000
TIAL1 Taeniopygia guttata ENSTGUG00000011148 N 0.000
TIAL1 Sorex araneus ENSSARG00000012980 N 0.000
TIAL1 Otolemur garnettii ENSOGAG00000011417 N 0.000
TIAL1 Erinaceus europaeus ENSEEUG00000011861 N 0.000
TIAL1 Myotis lucifugus ENSMLUG00000004645 N 0.000
TIAL1 Meleagris gallopavo ENSMGAG00000011368 N 0.000
TIAL1 Loxodonta africana ENSLAFG00000003412 N 0.000
TIAL1 Echinops telfairi ENSETEG00000020276 N 0.000
CAC95017 Xenopus laevis CAC95017 N 0.000