Mbnl2 (Rattus norvegicus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSRNOG00000010737 T03316_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.871
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.871
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000014300 CCCH ZF 16 40
ENSRNOP00000014300 CCCH ZF 57 72
ENSRNOP00000014300 CCCH ZF 177 203
ENSRNOP00000014300 CCCH ZF 215 237
ENSRNOP00000014315 CCCH ZF 16 40
ENSRNOP00000014315 CCCH ZF 57 72
ENSRNOP00000014315 CCCH ZF 177 203
ENSRNOP00000014315 CCCH ZF 215 237
ENSRNOP00000054366 CCCH ZF 16 40
ENSRNOP00000054366 CCCH ZF 57 72
ENSRNOP00000054366 CCCH ZF 177 203
ENSRNOP00000054366 CCCH ZF 215 237
ENSRNOP00000054367 CCCH ZF 16 40
ENSRNOP00000054367 CCCH ZF 57 72
ENSRNOP00000054367 CCCH ZF 177 203
ENSRNOP00000054367 CCCH ZF 215 237

Links

Other CCCH ZF family RBPs
Other Rattus norvegicus RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EFA75926.1 Polysphondylium pallidum EFA75926.1 N 0.000
ppa016726m Prunus persica ppa016726m N 0.000
ppa019720m Prunus persica ppa019720m N 0.000
ppa021588m Prunus persica ppa021588m N 0.000
ppa022673m Prunus persica ppa022673m N 0.000
ppa024392m Prunus persica ppa024392m N 0.000
ppa026182m Prunus persica ppa026182m N 0.000
ppa026240m Prunus persica ppa026240m N 0.000