PK16956.1 (Cannabis sativa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 PK16956.1 T17957_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK16956.1 KH 86 152

Links

Other KH family RBPs
Other Cannabis sativa RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.806
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.791
Cucsa.334300 Cucumis sativus Cucsa.334300 N 0.896
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.716
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.707
Glyma04g12370.1 Glycine max Glyma04g12370.1 N 0.896
Glyma06g48070.1 Glycine max Glyma06g48070.1 N 0.881
mgf006761m Mimulus guttatus mgf006761m N 0.851
GRMZM2G029029 Zea mays GRMZM2G029029 N 0.836
GRMZM2G092182 Zea mays GRMZM2G092182 N 0.851
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.701
Medtr3g016780 Medicago truncatula Medtr3g016780 N 0.806
chr3.CM0047.410.nc Lotus japonicus chr3.CM0047.410.nc N 0.821
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.707
MDP0000306088 Malus x domestica MDP0000306088 N 0.881
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.791
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.791
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.836
BGIOSIBCE008472 Oryza indica BGIOSIBCE008472 N 0.836
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.731
BRADI3G56540 Brachypodium distachyon BRADI3G56540 N 0.910
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.836
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.836
GSVIVG00014762001 Vitis vinifera GSVIVG00014762001 N 0.897
LOC_Os02g49080 Oryza sativa LOC_Os02g49080 N 0.836
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.731
POPTR_0001s47500 Populus trichocarpa POPTR_0001s47500 N 0.718
A9PGC0_POPTR Populus trichocarpa POPTR_0011s17110 N 0.718
SB04G029520 Sorghum bicolor Sb04g029520 N 0.851
28128.m000156 Ricinus communis 28128.m000156 N 0.803
cassava30587.valid.m1 Manihot esculenta cassava30587.valid.m1 N 0.881
ppa009341m Prunus persica ppa009341m N 0.955