LjSGA_139736.1.1 (Lotus japonicus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 LjSGA_139736.1.1 T21795_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_139736.1.1 KH 20 93

Links

Other KH family RBPs
Other Lotus japonicus RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.818
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.789
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.779
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.775
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.774
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.773
mgf011994m Mimulus guttatus mgf011994m N 0.769
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.753
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.753
28128.m000156 Ricinus communis 28128.m000156 N 0.750
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.750
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.750
MDP0000119110 Malus x domestica MDP0000119110 N 0.741
MDP0000501473 Malus x domestica MDP0000501473 N 0.741
PK23097.1 Cannabis sativa PK23097.1 N 0.741
SB02G006770 Sorghum bicolor Sb02g006770 N 0.734
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.733
MDP0000186494 Malus x domestica MDP0000186494 N 0.732
MDP0000665847 Malus x domestica MDP0000665847 N 0.732
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.730
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.728
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.728
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.725
ppa009341m Prunus persica ppa009341m N 0.720
29945.m000086 Ricinus communis 29945.m000086 N 0.720
Glyma04g12370.1 Glycine max Glyma04g12370.1 N 0.720
cassava30587.valid.m1 Manihot esculenta cassava30587.valid.m1 N 0.716
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.716
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.716
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.714
ppa009701m Prunus persica ppa009701m N 0.714
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.714
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.714
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.714
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.714
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.713
27955.m000377 Ricinus communis 27955.m000377 N 0.711
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.711
PK16956.1 Cannabis sativa PK16956.1 N 0.707
Glyma06g48070.1 Glycine max Glyma06g48070.1 N 0.707
BRADI3G56540 Brachypodium distachyon BRADI3G56540 N 0.707
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.704
SB01G003680 Sorghum bicolor Sb01g003680 N 0.704
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.704
PK22673.1 Cannabis sativa PK22673.1 N 0.702
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.702
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.702
MDP0000300654 Malus x domestica MDP0000300654 N 0.700