PMAA_027060 (Penicillium marneffei)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 PMAA_027060 T21953_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_027060.t1 KH 143 198
PMAA_027060.t1 KH 249 313

Links

Other KH family RBPs
Other Penicillium marneffei RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_04554 Botrytis cinerea BC1G_04554 N 0.769
An04g01620 Aspergillus niger CADANGAG00003873 N 0.808
ANIA_04431 Aspergillus nidulans CADANIAG00006023 N 0.776
AO090023000853 Aspergillus oryzae CADAORAG00007942 N 0.784
NFIA_109000 Neosartorya fischeri CADNFIAG00009878 N 0.810
estExt_fgenesh1_pg.C_130006 Neurospora tetrasperma estExt_fgenesh1_pg.C_130006 N 0.784
estExt_fgenesh1_pm.C_70243 Myceliophthora thermophila estExt_fgenesh1_pm.C_70243 N 0.794
estExt_Genewise1Plus.C_100691 Neurospora discreta estExt_Genewise1Plus.C_100691 N 0.792
estExt_Genewise1Plus.C_chr_120306 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120306 N 0.714
fgenesh1_pm.C_scaffold_12000103 Trichoderma atroviride fgenesh1_pm.C_scaffold_12000103 N 0.714
fgenesh1_pm.C_scaffold_17000077 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_17000077 N 0.752
fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA Thielavia terrestris fgenesh2_kg.6_#_197_#_798_1_CCPH_CCPI_EXTA N 0.770
gw1.2.55.1 Trichoderma virens gw1.2.55.1 N 0.732
PredSwiss_EST208.1 Pneumocystis carinii PredSwiss_EST208.1 N 0.702
estExt_Genewise1.C_21959 Cryphonectria parasitica estExt_Genewise1.C_21959 N 0.738
GSTUMT00003892001 Tuber melanosporum GSTUMT00003892001 N 0.760
Pa_3_6460 Podospora anserina Pa_3_6460 N 0.778
AFUA_4G07220 Aspergillus fumigatus CADAFUAG00008115 N 0.817
AFLA_112630 Aspergillus flavus CADAFLAG00004997 N 0.784
BDBG_02628 Blastomyces dermatitidis BDBG_02628 N 0.824
CIMG_04080 Coccidioides immitis CIMG_04080 N 0.852
CPSG_03190 Coccidioides posadasii CPSG_03190 N 0.852
FOXG_08033 Fusarium oxysporum FOXG_08033 N 0.732
FVEG_04953 Fusarium verticillioides FVEG_04953 N 0.715
GLRG_05217 Colletotrichum graminicola GLRG_05217 N 0.732
HCAG_05583 Histoplasma capsulatum HCAG_05583 N 0.816
MCYG_01186 Microsporum canis MCYG_01186 N 0.808
MGYG_01738 Microsporum gypseum MGYG_01738 N 0.800
PABG_07569 Paracoccidioides brasiliensis PABG_07569 N 0.808
SS1G_03925 Sclerotinia sclerotiorum SS1G_03925 N 0.786
TERG_07604 Trichophyton rubrum TERG_07604 N 0.800
TESG_01394 Trichophyton tonsurans TESG_01394 N 0.800
VDAG_01960 Verticillium dahliae VDAG_01960 N 0.720
VDBG_01592 Verticillium albo atrum VDBG_01592 N 0.720
ACLA_046540 Aspergillus clavatus CADACLAG00004448 N 0.802
Pc22g18420 Penicillium chrysogenum Pc22g18420 N 0.736