CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
TNRC6B
(
Gasterosteus aculeatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGACG00000007421
T37454_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000009843
RRM
645
709
LLLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTHGSALIRYSSRQEAAKAQGALHMCVLGNTTIL
Links
Other
RRM
family RBPs
Other
Gasterosteus aculeatus
RBPs
119 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Tbg972.10.7440
Trypanosoma brucei
Tbg972.10.7440
N
0.000
Tc00.1047053507639.30
Trypanosoma cruzi
Tc00.1047053507639.30
N
0.000