CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XP_001110036.1
(
Macaca mulatta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMMUG00000020845
T38983_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000027434
RRM
38
108
IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKVKGRTIR
Links
Other
RRM
family RBPs
Other
Macaca mulatta
RBPs
97 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.930
GF14433
Drosophila ananassae
FBgn0091460
N
0.792
GG21207
Drosophila erecta
FBgn0113387
N
0.778
GH13830
Drosophila grimshawi
FBgn0121306
N
0.764
GI11259
Drosophila mojavensis
FBgn0134020
N
0.792
GI11260
Drosophila mojavensis
FBgn0134021
N
0.792
GI20215
Drosophila mojavensis
FBgn0142951
N
0.792
GL26176
Drosophila persimilis
FBgn0163758
N
0.792
GM17378
Drosophila sechellia
FBgn0172288
N
0.764
GD24233
Drosophila simulans
FBgn0195582
N
0.764
GJ13600
Drosophila virilis
FBgn0200822
N
0.806
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.792
CG10466
Drosophila melanogaster
FBgn0032822
N
0.764
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.930
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.986
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.972
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.903
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.958
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.803
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.889
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.903
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.861
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.986
GK14925
Drosophila willistoni
FBgn0216930
N
0.792
GE13281
Drosophila yakuba
FBgn0230967
N
0.764
gw1.1.2440.1
Mucor circinelloides
gw1.1.2440.1
N
0.722
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.792
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.792
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.792
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.720
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.986
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.720
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.833
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.833
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.833
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.750
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.778
ISCW009356
Ixodes scapularis
ISCW009356
N
0.736
PHUM617480
Pediculus humanus
PHUM617480
N
0.792
145168
Helobdella robusta
145168
N
0.750
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.833
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.819
e_gw1.98.15.1
Volvox carteri
e_gw1.98.15.1
N
0.736
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.708
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.736
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.792
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.833
AAH56844
Xenopus laevis
AAH56844
N
0.733
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.915
Bm1_02690
Brugia malayi
Bm1_02690
N
0.764
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.889
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.889
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.946
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.986
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.972
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.778
rbmx2
Danio rerio
ENSDARG00000044380
N
0.903
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.986
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.915
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.958
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.944
CRE26315
Caenorhabditis remanei
CRE26315
N
0.722
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.722
CpipJ_CPIJ015641
Culex pipiens
CpipJ_CPIJ015641
N
0.707
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.764
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.750
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.819
AAEL002461
Aedes aegypti
AAEL002461
N
0.778
AGAP000977
Anopheles gambiae
AGAP000977
N
0.778
C30B5.4
Caenorhabditis elegans
C30B5.4
N
0.722
CBG02589
Caenorhabditis briggsae
CBG02589
N
0.708
CPIJ015641
Culex quinquefasciatus
CPIJ015641
N
0.707
RBMX2
Homo sapiens
ENSG00000134597
N
0.986
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.861
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.986
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.792
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.944
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.958
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.958
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.878
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.932
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.787
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.986
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.915
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.887
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.944
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.901
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.972
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.986
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.944
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.905
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.889
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.972
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.887
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.986
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.986
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.875