CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPH3
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000002260
T39447_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000003582
RRM
37
106
VRLRGLPFGCSKEEIVQFFTGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIE
ENSOANP00000003582
RRM
223
289
VHMRGLPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMRNRHD
ENSOANP00000003583
RRM
19
88
VRLRGLPFGCSKEEIVQFFTGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIE
ENSOANP00000003583
RRM
198
265
VHMRGLPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIE
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
49 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
60758
Aureococcus anophagefferens
60758
N
0.000
PTTG_10688
Puccinia triticina
PTTG_10688
N
0.000
PTTG_10645
Puccinia triticina
PTTG_10645
N
0.000
PTTG_10552
Puccinia triticina
PTTG_10552
N
0.000
PTTG_10451
Puccinia triticina
PTTG_10451
N
0.000
PTTG_10291
Puccinia triticina
PTTG_10291
N
0.000
PTTG_10119
Puccinia triticina
PTTG_10119
N
0.000
PTTG_10004
Puccinia triticina
PTTG_10004
N
0.000
PTTG_09789
Puccinia triticina
PTTG_09789
N
0.000
PTTG_09697
Puccinia triticina
PTTG_09697
N
0.000
PTTG_09518
Puccinia triticina
PTTG_09518
N
0.000
PTTG_09362
Puccinia triticina
PTTG_09362
N
0.000
PTTG_09070
Puccinia triticina
PTTG_09070
N
0.000
PTTG_09062
Puccinia triticina
PTTG_09062
N
0.000
PTTG_08980
Puccinia triticina
PTTG_08980
N
0.000
PTTG_08960
Puccinia triticina
PTTG_08960
N
0.000
PTTG_10706
Puccinia triticina
PTTG_10706
N
0.000
PTTG_10713
Puccinia triticina
PTTG_10713
N
0.000
LOC_Os12g15720
Oryza sativa
LOC_Os12g15720
N
0.000
LOC_Os02g37790
Oryza sativa
LOC_Os02g37790
N
0.000
LOC_Os02g26040
Oryza sativa
LOC_Os02g26040
N
0.000
LOC_Os01g32470
Oryza sativa
LOC_Os01g32470
N
0.000
CBN00181
Caenorhabditis brenneri
CBN00181
N
0.000
BRADI3G11560
Brachypodium distachyon
BRADI3G11560
N
0.000
PTTG_11563
Puccinia triticina
PTTG_11563
N
0.000
PTTG_11299
Puccinia triticina
PTTG_11299
N
0.000
PTTG_11278
Puccinia triticina
PTTG_11278
N
0.000
PTTG_11204
Puccinia triticina
PTTG_11204
N
0.000
PTTG_11068
Puccinia triticina
PTTG_11068
N
0.000
PTTG_11057
Puccinia triticina
PTTG_11057
N
0.000
PTTG_10809
Puccinia triticina
PTTG_10809
N
0.000
PTTG_10798
Puccinia triticina
PTTG_10798
N
0.000
PTTG_10751
Puccinia triticina
PTTG_10751
N
0.000
PTTG_08777
Puccinia triticina
PTTG_08777
N
0.000
PTTG_08665
Puccinia triticina
PTTG_08665
N
0.000
PTTG_04681
Puccinia triticina
PTTG_04681
N
0.000
PTTG_03874
Puccinia triticina
PTTG_03874
N
0.000
PTTG_03611
Puccinia triticina
PTTG_03611
N
0.000
PTTG_03581
Puccinia triticina
PTTG_03581
N
0.000
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.000
PTTG_01003
Puccinia triticina
PTTG_01003
N
0.000
PGTG_20442
Puccinia graminis
PGTG_20442
N
0.000
PGTG_18613
Puccinia graminis
PGTG_18613
N
0.000
PGTG_15116
Puccinia graminis
PGTG_15116
N
0.000
PGTG_09834
Puccinia graminis
PGTG_09834
N
0.000
PGTG_05408
Puccinia graminis
PGTG_05408
N
0.000
PGTG_05406
Puccinia graminis
PGTG_05406
N
0.000
PGTG_03348
Puccinia graminis
PGTG_03348
N
0.000
PGTG_03172
Puccinia graminis
PGTG_03172
N
0.000
CHGG_02707
Chaetomium globosum
CHGG_02707
N
0.000
PTTG_05127
Puccinia triticina
PTTG_05127
N
0.000
PTTG_05245
Puccinia triticina
PTTG_05245
N
0.000
PTTG_08372
Puccinia triticina
PTTG_08372
N
0.000
PTTG_08342
Puccinia triticina
PTTG_08342
N
0.000
PTTG_08330
Puccinia triticina
PTTG_08330
N
0.000
PTTG_08329
Puccinia triticina
PTTG_08329
N
0.000
PTTG_07469
Puccinia triticina
PTTG_07469
N
0.000
PTTG_07232
Puccinia triticina
PTTG_07232
N
0.000
PTTG_07053
Puccinia triticina
PTTG_07053
N
0.000
PTTG_07033
Puccinia triticina
PTTG_07033
N
0.000
PTTG_06885
Puccinia triticina
PTTG_06885
N
0.000
PTTG_06752
Puccinia triticina
PTTG_06752
N
0.000
PTTG_06677
Puccinia triticina
PTTG_06677
N
0.000
PTTG_06629
Puccinia triticina
PTTG_06629
N
0.000
PTTG_06000
Puccinia triticina
PTTG_06000
N
0.000
PTTG_05387
Puccinia triticina
PTTG_05387
N
0.000
PTTG_05279
Puccinia triticina
PTTG_05279
N
0.000
CHGG_00209
Chaetomium globosum
CHGG_00209
N
0.000